RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 CTAGE8P0CG41 777 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 RPA3P35244 121 aaPredicted RBP16.64■□□□□ 0.25
USP35-202ENST00000528910 MAGEA4P43358 317 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 PGGT1BP53609 377 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 YBX1P67809 324 aaKnown RBP16.64■□□□□ 0.25
USP35-202ENST00000528910 GUCY2DQ02846 1103 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 TBR1Q16650 682 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 PHKG1Q16816 387 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 TAF1BQ53T94 588 aaPredicted RBP16.64■□□□□ 0.25
USP35-202ENST00000528910 ICE2Q659A1 982 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 ZNF425Q6IV72 752 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 LCN10Q6JVE6 187 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 FAM199XQ6PEV8 388 aaPredicted RBP16.64■□□□□ 0.25
USP35-202ENST00000528910 CTAGE6Q86UF2 777 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 MCATQ8IVS2 390 aaKnown RBP16.64■□□□□ 0.25
USP35-202ENST00000528910 CTAGE4Q8IX94 777 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 PPFIBP2Q8ND30 876 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 KIF18AQ8NI77 898 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 MCOLN3Q8TDD5 553 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 SLC39A7Q92504 469 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 EXTL1Q92935 676 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 CCDC138Q96M89 665 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 GBP5Q96PP8 586 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 CPNE1Q99829 537 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 DPH7Q9BTV6 452 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 SPRTNQ9H040 489 aaPredicted RBP16.64■□□□□ 0.25
USP35-202ENST00000528910 ACTL8Q9H568 366 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 POPDC3Q9HBV1 291 aa16.64■□□□□ 0.25
USP35-202ENST00000528910 CREG1O75629 220 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 PIAS1O75925 651 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 PRKAR1AP10644 381 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 PTPN4P29074 926 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 STX2P32856 288 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 AP1S2P56377 157 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 TAS2R39P59534 338 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 TBPL1P62380 186 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 ABATP80404 500 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 PRDX1Q06830 199 aaKnown RBP16.63■□□□□ 0.25
USP35-202ENST00000528910 PTCHD3Q3KNS1 767 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 TCTE1Q5JU00 501 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 SBSNQ6UWP8 590 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 TMEM207Q6UWW9 146 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 C3orf62Q6ZUJ4 267 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 SYVN1Q86TM6 617 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 PAQR7Q86WK9 346 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 CCDC25Q86WR0 208 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 ZNF655Q8N720 491 aaPredicted RBP16.63■□□□□ 0.25
USP35-202ENST00000528910 ANKRD7Q92527 254 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 RBBP8Q99708 897 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 SELENOSQ9BQE4 189 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 PLCD4Q9BRC7 762 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 ACAT2Q9BWD1 397 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 SLC7A5P2Q9GIP4 190 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 LRRC4CQ9HCJ2 640 aa16.63■□□□□ 0.25
USP35-202ENST00000528910 MRPS30Q9NP92 439 aaKnown RBP16.63■□□□□ 0.25
USP35-202ENST00000528910 FITM1A5D6W6 292 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 SRPX2O60687 465 aaPredicted RBP16.62■□□□□ 0.25
USP35-202ENST00000528910 KATNA1O75449 491 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 ENO2P09104 434 aaPredicted RBP16.62■□□□□ 0.25
USP35-202ENST00000528910 GP5P40197 560 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 RPS15P62841 145 aaKnown RBP16.62■□□□□ 0.25
USP35-202ENST00000528910 POU4F1Q01851 419 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 RELAQ04206 551 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 NCF4Q15080 339 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 GLE1Q53GS7 698 aaKnown RBP16.62■□□□□ 0.25
USP35-202ENST00000528910 ATP1A1-AS1Q5TC04 95 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 YOD1Q5VVQ6 348 aaPredicted RBP16.62■□□□□ 0.25
USP35-202ENST00000528910 BORAQ6PGQ7 559 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 MBOAT1Q6ZNC8 495 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 RELL1Q8IUW5 271 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 GPR22Q99680 433 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 ZFYVE21Q9BQ24 234 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 NLNQ9BYT8 704 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 CCDC177Q9NQR7 707 aaPredicted RBP16.62■□□□□ 0.25
USP35-202ENST00000528910 DMGDHQ9UI17 866 aaKnown RBP16.62■□□□□ 0.25
USP35-202ENST00000528910 IKZF3Q9UKT9 509 aa16.62■□□□□ 0.25
USP35-202ENST00000528910 NOVA2Q9UNW9 492 aaKnown RBP16.62■□□□□ 0.25
USP35-202ENST00000528910 SMG1Q96Q15 3661 aaKnown RBP16.62■□□□□ 0.25
USP35-202ENST00000528910 C1QL1O75973 258 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 AGXTP21549 392 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 ARSFP54793 590 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 RPS18P62269 152 aaKnown RBP16.61■□□□□ 0.25
USP35-202ENST00000528910 NAB1Q13506 487 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 TSTA3Q13630 321 aaPredicted RBP16.61■□□□□ 0.25
USP35-202ENST00000528910 ZNF460Q14592 562 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 GRM7Q14831 915 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 PPP1R3AQ16821 1122 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 UGT8Q16880 541 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 KBTBD12Q3ZCT8 623 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 PRAMEF13Q5VWM6 474 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 FRMPD2BQ6IN97 320 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 AGTRAPQ6RW13 159 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 CEP97Q8IW35 865 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 NKAPQ8N5F7 415 aaKnown RBP16.61■□□□□ 0.25
USP35-202ENST00000528910 ENDOVQ8N8Q3 282 aaKnown RBP16.61■□□□□ 0.25
USP35-202ENST00000528910 C17orf62Q9BQA9 187 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 NDC1Q9BTX1 674 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 DHRS4Q9BTZ2 278 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 SGPP1Q9BX95 441 aa16.61■□□□□ 0.25
USP35-202ENST00000528910 SEMA4CQ9C0C4 833 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms