RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 KCNK10P57789 538 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 HSPA14Q0VDF9 509 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 TMED2Q15363 201 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 C1orf189Q5VU69 101 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 PTRHD1Q6GMV3 140 aaKnown RBP10.09□□□□□ -0.79
CPSF1-203ENST00000527916 RHBDD2Q6NTF9 364 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 GFRALQ6UXV0 394 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 NAPRTQ6XQN6 538 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 SDCCAG8Q86SQ7 713 aaPredicted RBP10.09□□□□□ -0.79
CPSF1-203ENST00000527916 DNAJC22Q8N4W6 341 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 CHTF18Q8WVB6 975 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 MFSD3Q96ES6 412 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 LHPPQ9H008 270 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 FAM60AQ9NP50 221 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 ENAMQ9NRM1 1142 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 TXLNGQ9NUQ3 528 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 SPHK1Q9NYA1 384 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 MARCH4Q9P2E8 410 aaPredicted RBP10.09□□□□□ -0.79
CPSF1-203ENST00000527916 GNPTGQ9UJJ9 305 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 FBXL4Q9UKA2 621 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 SOX13Q9UN79 622 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 FBN3Q75N90 2809 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 IQCF5A8MTL0 148 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 ISM1B1AKI9 464 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 H3BMM5 538 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 MASP2O00187 686 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 PRICKLE3O43900 615 aaPredicted RBP10.08□□□□□ -0.8
CPSF1-203ENST00000527916 NDUFS3O75489 264 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 VAPBO95292 243 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 S1PR4O95977 384 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 UMODP07911 640 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 PVRP15151 417 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 CD9P21926 228 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 MMP11P24347 488 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 MGAT1P26572 445 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 ARNTP27540 789 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 PKLRP30613 574 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 CRADDP78560 199 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 RBPJQ06330 500 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 GRB7Q14451 532 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 KCNJ11Q14654 390 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 ZIC1Q15915 447 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 INAQ16352 499 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 CYP1B1Q16678 543 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 TYSND1Q2T9J0 566 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 NKAIN1Q4KMZ8 207 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 RNF187Q5TA31 235 aaPredicted RBP10.08□□□□□ -0.8
CPSF1-203ENST00000527916 MRNIPQ6NTE8 343 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 TLDC1Q6P9B6 456 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 TTC23LQ6PF05 361 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 ISLR2Q6UXK2 745 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 LDB1Q86U70 411 aaPredicted RBP10.08□□□□□ -0.8
CPSF1-203ENST00000527916 VRK3Q8IV63 474 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 DCUN1D3Q8IWE4 304 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 ZNF295-AS1Q8N0V1 137 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 OR2L8Q8NGY9 312 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 LKAAEAR1Q8TD35 194 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 NR4A3Q92570 626 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 RAD51AP1Q96B01 352 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 C14orf79Q96F83 325 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 BIRC8Q96P09 236 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 LMF1Q96S06 567 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 NAP1L3Q99457 506 aaPredicted RBP10.08□□□□□ -0.8
CPSF1-203ENST00000527916 SLC6A20Q9NP91 592 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 CDC23Q9UJX2 597 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 PLCL2Q9UPR0 1127 aa10.08□□□□□ -0.8
CPSF1-203ENST00000527916 NUP210LQ5VU65 1888 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 TCRBV7S3A2A0A539 114 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 DYTNA2CJ06 578 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 RASGRF2O14827 1237 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 ZSCAN9O15535 394 aaPredicted RBP10.07□□□□□ -0.8
CPSF1-203ENST00000527916 C1orf105O95561 183 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 KRT14P02533 472 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 ESR1P03372 595 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 PAMP19021 973 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 OGNP20774 298 aaKnown RBP10.07□□□□□ -0.8
CPSF1-203ENST00000527916 AGAP20933 346 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 ATP5DP30049 168 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 PEBP1P30086 187 aaKnown RBP10.07□□□□□ -0.8
CPSF1-203ENST00000527916 CA7P43166 264 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 SMSP52788 366 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 GBX1Q14549 363 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 SLC9A5Q14940 896 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 ZNF324BQ6AW86 544 aaPredicted RBP10.07□□□□□ -0.8
CPSF1-203ENST00000527916 KIAA0930Q6ICG6 404 aaPredicted RBP10.07□□□□□ -0.8
CPSF1-203ENST00000527916 MRPL14Q6P1L8 145 aaKnown RBP10.07□□□□□ -0.8
CPSF1-203ENST00000527916 OTOAQ7RTW8 1153 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 CAND1Q86VP6 1230 aaKnown RBP10.07□□□□□ -0.8
CPSF1-203ENST00000527916 KRT222Q8N1A0 295 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 LINC01555Q8NAE3 123 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 MCUQ8NE86 351 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 OR1N1Q8NGS0 311 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 GSDMBQ8TAX9 411 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 HMGCLL1Q8TB92 370 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 MAGEC3Q8TD91 643 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 DENND1AQ8TEH3 1009 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 MAGOHBQ96A72 148 aaKnown RBP10.07□□□□□ -0.8
CPSF1-203ENST00000527916 ZUFSPQ96AP4 578 aa10.07□□□□□ -0.8
CPSF1-203ENST00000527916 TRIM56Q9BRZ2 755 aaKnown RBP10.07□□□□□ -0.8
CPSF1-203ENST00000527916 NDC1Q9BTX1 674 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms