RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 FCAMRQ8WWV6 532 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 TIFAQ96CG3 184 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 NUDT4Q9NZJ9 180 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 PCDHB1Q9Y5F3 818 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 H3BSA7 217 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 ALOX15BO15296 676 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 IFNA17P01571 189 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 WASP42768 502 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 PSEN2P49810 448 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 SMAD3P84022 425 aaKnown RBP13.38□□□□□ -0.27
LRRK1-202ENST00000525284 MOGSQ13724 837 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 PIGZQ86VD9 579 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 ARL14Q8N4G2 192 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 MFSD2AQ8NA29 543 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 EPS8L1Q8TE68 723 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 GLYATL2Q8WU03 294 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 ROPN1LQ96C74 230 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 SYT4Q9H2B2 425 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 AGO3Q9H9G7 860 aaKnown RBP13.38□□□□□ -0.27
LRRK1-202ENST00000525284 NPIPA5E9PKD4 350 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 K7EPK0 472 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 CLDN5O00501 218 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 B3GALT2O43825 422 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 ENTPD1P49961 510 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 GPR68Q15743 365 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 MOB2Q70IA6 237 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 FAM71E2Q8N5Q1 922 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 SHKBP1Q8TBC3 707 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 PREBQ9HCU5 417 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 NPIPA1Q9UND3 350 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 ST14Q9Y5Y6 855 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 SHOXO15266 292 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 SLC34A2O95436 690 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 TGFB3P10600 412 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 GTF2F2P13984 249 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 NRLP54845 237 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 PLGLB1Q02325 96 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 PON3Q15166 354 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 GET4Q7L5D6 327 aaPredicted RBP13.37□□□□□ -0.27
LRRK1-202ENST00000525284 FITM2Q8N6M3 262 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 ZNF781Q8N8C0 355 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 CRB1P82279 1406 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 A8MUA0 341 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 INPPL1O15357 1258 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 TNFSF12O43508 249 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 CLEC3AO75596 197 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 ARL6IP5O75915 188 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 DNAJA1P31689 397 aaKnown RBP13.37□□□□□ -0.27
LRRK1-202ENST00000525284 RARRES1P49788 294 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 CRISP3P54108 245 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 CTBP2P56545 445 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 MPP1Q00013 466 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 FAM189A2Q15884 450 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 C9orf43Q8TAL5 461 aaPredicted RBP13.37□□□□□ -0.27
LRRK1-202ENST00000525284 SCRN2Q96FV2 425 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 P2RY11Q96G91 374 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 PBDC1Q9BVG4 233 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 ARL6Q9H0F7 186 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 SERINC1Q9NRX5 453 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 VSTM5A8MXK1 200 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 INMT-MINDY4F8WBC2 141 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.27
LRRK1-202ENST00000525284 RAD51DO75771 328 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 PSMD10O75832 226 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 HMGN1P05114 100 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 IDH3AP50213 366 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 GALNT13Q8IUC8 556 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 DTX3Q8N9I9 347 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 TRMT61BQ9BVS5 477 aaKnown RBP13.37□□□□□ -0.27
LRRK1-202ENST00000525284 LRRC4CQ9HCJ2 640 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 PCDHGB6Q9Y5F9 930 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 FOXO6A8MYZ6 492 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 KHNYNO15037 678 aaKnown RBP13.37□□□□□ -0.27
LRRK1-202ENST00000525284 CDH1P12830 882 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 POLR2HP52434 150 aaKnown RBP13.37□□□□□ -0.27
LRRK1-202ENST00000525284 NCSTNQ92542 709 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 SULT4A1Q9BR01 284 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 ADAP2Q9NPF8 381 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 OC90Q02509 493 aaPredicted RBP13.37□□□□□ -0.27
LRRK1-202ENST00000525284 DSC3Q14574 896 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 ABRAXAS2Q15018 415 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 KCTD15Q96SI1 283 aaPredicted RBP13.37□□□□□ -0.27
LRRK1-202ENST00000525284 TBL1XR1Q9BZK7 514 aa13.37□□□□□ -0.27
LRRK1-202ENST00000525284 PRORSD1PA6NEY8 169 aa13.36□□□□□ -0.27
LRRK1-202ENST00000525284 CLCN2P51788 898 aa13.36□□□□□ -0.27
LRRK1-202ENST00000525284 LGI4Q8N135 537 aa13.36□□□□□ -0.27
LRRK1-202ENST00000525284 LCN9Q8WX39 176 aa13.36□□□□□ -0.27
LRRK1-202ENST00000525284 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.27
LRRK1-202ENST00000525284 WRAP53Q9BUR4 548 aaKnown RBP13.36□□□□□ -0.27
LRRK1-202ENST00000525284 DPEP2Q9H4A9 486 aa13.36□□□□□ -0.27
LRRK1-202ENST00000525284 PLK2Q9NYY3 685 aa13.36□□□□□ -0.27
LRRK1-202ENST00000525284 REV1Q9UBZ9 1251 aa13.36□□□□□ -0.27
LRRK1-202ENST00000525284 TMED5Q9Y3A6 229 aa13.36□□□□□ -0.27
LRRK1-202ENST00000525284 LRRN3E7EW58 273 aa13.36□□□□□ -0.27
LRRK1-202ENST00000525284 RHOP08100 348 aa13.36□□□□□ -0.27
LRRK1-202ENST00000525284 LEPRP48357 1165 aaKnown RBP13.36□□□□□ -0.27
LRRK1-202ENST00000525284 LRRC38Q5VT99 294 aa13.36□□□□□ -0.27
LRRK1-202ENST00000525284 SLC9B2Q86UD5 537 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms