RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 CA5AP35218 305 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 PTGS2P35354 604 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 DMPKQ09013 629 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 NFATC4Q14934 902 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 TBCCQ15814 346 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 RFWD3Q6PCD5 774 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 ENPP7Q6UWV6 458 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 DTX2Q86UW9 622 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 ARHGEF19Q8IW93 802 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 PAF1Q8N7H5 531 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 OR10G6Q8NH81 332 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 MBD3L2Q8NHZ7 208 aaPredicted RBP6.74□□□□□ -1.33
NEDD8-203ENST00000524927 ROBO4Q8WZ75 1007 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 TAF4BQ92750 862 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 AZIN2Q96A70 460 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 CCDC114Q96M63 670 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 ZHX3Q9H4I2 956 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 KCNJ14Q9UNX9 436 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 DRG1Q9Y295 367 aaKnown RBP6.74□□□□□ -1.33
NEDD8-203ENST00000524927 REXO2Q9Y3B8 237 aaKnown RBP6.74□□□□□ -1.33
NEDD8-203ENST00000524927 GTF3C1Q12789 2109 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 LRP4O75096 1905 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 ANK3Q12955 4377 aaKnown RBP6.73□□□□□ -1.33
NEDD8-203ENST00000524927 CENPVL1A0A0U1RR11 272 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 IDSB3KWA1 339 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 E9PMD0 336 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 J3KTA2 159 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 AGPSO00116 658 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 PSMD9O00233 223 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 SLC16A3O15427 465 aaKnown RBP6.73□□□□□ -1.33
NEDD8-203ENST00000524927 SLC19A2O60779 497 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 VNN1O95497 513 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 FAM200BP0CF97 657 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 FGF5P12034 268 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 TACR2P21452 398 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 IDSP22304 550 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 RBL1P28749 1068 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 AKT1P31749 480 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 MAPK9P45984 424 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 PLK1P53350 603 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 ARL4CP56559 192 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 KEAP1Q14145 624 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 NECTIN1Q15223 517 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 FAM133BQ5BKY9 247 aaKnown RBP6.73□□□□□ -1.33
NEDD8-203ENST00000524927 ATPAF1Q5TC12 328 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-203ENST00000524927 CRIP3Q6Q6R5 217 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 VPS36Q86VN1 386 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 HIPK1Q86Z02 1210 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 GALNT16Q8N428 558 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 SLC2A14Q8TDB8 520 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 PHF10Q8WUB8 498 aaKnown RBP6.73□□□□□ -1.33
NEDD8-203ENST00000524927 FKBP10Q96AY3 582 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 FBXL20Q96IG2 436 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 ANKRD36BP1Q96IX9 119 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 ZSCAN31Q96LW9 406 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-203ENST00000524927 DDX50Q9BQ39 737 aaKnown RBP6.73□□□□□ -1.33
NEDD8-203ENST00000524927 FEM1AQ9BSK4 669 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 MMTAG2Q9BU76 263 aaKnown RBP6.73□□□□□ -1.33
NEDD8-203ENST00000524927 ZBTB20Q9HC78 741 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-203ENST00000524927 OLA1Q9NTK5 396 aaKnown RBP6.73□□□□□ -1.33
NEDD8-203ENST00000524927 IL17CQ9P0M4 197 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 SLC25A13Q9UJS0 675 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 MEMO1Q9Y316 297 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 CSAG2Q9Y5P2 127 aa6.73□□□□□ -1.33
NEDD8-203ENST00000524927 MYH11P35749 1972 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 OR2W5A6NFC9 320 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 HMX3A6NHT5 357 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 K7ENM7 598 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 M0R3H8 397 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 EIF5BO60841 1220 aaKnown RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 SPAG6O75602 509 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 ACTL6BO94805 426 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 PEX11BO96011 259 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 ERBB2P04626 1255 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 FGF1P05230 155 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 CHRM2P08172 466 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 TIRAPP58753 221 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 RPS24P62847 133 aaKnown RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 TNNC1P63316 161 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 DGCR2P98153 550 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 TIAL1Q01085 375 aaKnown RBP eCLIP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 DEFA6Q01524 100 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 C3AR1Q16581 482 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 P3H1Q32P28 736 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 TEDDM1Q5T9Z0 273 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 LIN54Q6MZP7 749 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 VWA1Q6PCB0 445 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 IGFL2Q6UWQ7 119 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 CLEC20AQ6ZU45 233 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 CAND1Q86VP6 1230 aaKnown RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 LNX2Q8N448 690 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 ZBTB2Q8N680 514 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 CLEC1AQ8NC01 280 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 OR2A12Q8NGT7 310 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 GOT1L1Q8NHS2 421 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 SGMS2Q8NHU3 365 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 STT3BQ8TCJ2 826 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 PROKR1Q8TCW9 393 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 XAGE5Q8WWM1 108 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 ASB10Q8WXI3 467 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms