RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	SLC22A15	Q8IZD6	547 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	DNAJC22	Q8N4W6	341 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	OR6F1	Q8NGZ6	308 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	SETD6	Q8TBK2	473 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	ZNF675	Q8TD23	568 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	TP53INP1	Q96A56	240 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	COL21A1	Q96P44	957 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	ZBED2	Q9BTP6	218 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	REXO4	Q9GZR2	422 aa	Known RBP	9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	ELOVL2	Q9NXB9	296 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	SPAST	Q9UBP0	616 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	PCDHB8	Q9UN66	801 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	CFL2	Q9Y281	166 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	FNDC3A	Q9Y2H6	1198 aa	Known RBP	9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	SLC45A1	Q9Y2W3	748 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	PCDHGA6	Q9Y5G7	932 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	LOC100506127	A0A0U1RQW1	187 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	KMO	O15229	486 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	SCO2	O43819	266 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	ZNF623	O75123	536 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	CR2	P20023	1033 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	DGKA	P23743	735 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	KDELR2	P33947	212 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	MAGEA11	P43364	429 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	SLC15A1	P46059	708 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	PXN	P49023	591 aa	Predicted RBP	9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	OR2B6	P58173	313 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	DMPK	Q09013	629 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	CSTF3	Q12996	717 aa	Known RBP	9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	PRSS36	Q5K4E3	855 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	ZCCHC8	Q6NZY4	707 aa	Known RBP	9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	CBLL1	Q75N03	491 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	VASH1	Q7L8A9	365 aa	Predicted RBP	9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	ZSWIM9	Q86XI8	627 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	EFHB	Q8N7U6	833 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	BEND7	Q8N7W2	519 aa	Predicted RBP	9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	ASCC1	Q8N9N2	400 aa	Known RBP	9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	FLCN	Q8NFG4	579 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	NELL1	Q92832	810 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	CRELD1	Q96HD1	420 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	RAD9A	Q99638	391 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	INPP5K	Q9BT40	448 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	CLPB	Q9H078	707 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	ZNF408	Q9H9D4	720 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	FKBP14	Q9NWM8	211 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	PCDHGA3	Q9Y5H0	932 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	KLK4	Q9Y5K2	254 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	AP1M2	Q9Y6Q5	423 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141	PCNT	O95613	3336 aa		9.98	□□□□□ -0.81
SPIDR-225	ENST00000524141		A0A0D9SEW6	157 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	SLC12A8	A0AV02	714 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	PDHX	O00330	501 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	HMBS	P08397	361 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	ZNF7	P17097	686 aa	Predicted RBP	9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	TACR2	P21452	398 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	C21orf33	P30042	268 aa	Predicted RBP	9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	RGR	P47804	291 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	MRPS15	P82914	257 aa	Known RBP	9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	STARD3	Q14849	445 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	EIF4H	Q15056	248 aa	Known RBP	9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	RNF19B	Q6ZMZ0	732 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	PLEKHH3	Q7Z736	793 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	ANKRD46	Q86W74	232 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	HSH2D	Q96JZ2	352 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	APOL5	Q9BWW9	433 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	AP5M1	Q9H0R1	490 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	BPIFA1	Q9NP55	256 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	TLR8	Q9NR97	1041 aa	Known RBP	9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	CRNN	Q9UBG3	495 aa	Predicted RBP	9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	TSR3	Q9UJK0	312 aa	Known RBP	9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	AGO1	Q9UL18	857 aa	Known RBP	9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	BTBD3	Q9Y2F9	522 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	N6AMT1	Q9Y5N5	214 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	RAI2	Q9Y5P3	530 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	LOC730098	B7Z3J9	87 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	DIRAS1	O95057	198 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	EPN2	O95208	641 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	CLDN9	O95484	217 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	OR4Q2	P0C623	313 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	ACPP	P15309	386 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	MAG	P20916	626 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	RPS3	P23396	243 aa	Known RBP eCLIP	9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	TIE1	P35590	1138 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	GGT2	P36268	569 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	CDKN2C	P42773	168 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	HTR3A	P46098	478 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	ARPC4	P59998	168 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	ZFP69	Q49AA0	526 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	ATAD3C	Q5T2N8	411 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	SDHAF4	Q5VUM1	108 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	TMC5	Q6UXY8	1006 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	CCDC190	Q86UF4	302 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	UBQLNL	Q8IYU4	475 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	ST13P5	Q8NFI4	369 aa	Predicted RBP	9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	NPLOC4	Q8TAT6	608 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	RASSF5	Q8WWW0	418 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	UBE2F	Q969M7	185 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	FBXO32	Q969P5	355 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	EXOC2	Q96KP1	924 aa		9.97	□□□□□ -0.81
SPIDR-225	ENST00000524141	CEP19	Q96LK0	163 aa		9.97	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms