RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 CLDN1O95832 211 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 CSN3P07498 182 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 SLC2A2P11168 524 aaPredicted RBP3.59□□□□□ -1.83
PTPN12-215ENST00000522115 CCR10P46092 362 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 VAMP7P51809 220 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 LMO4P61968 165 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 EFTUD2Q15029 972 aaKnown RBP eCLIP3.59□□□□□ -1.837e-6■■■■■ 30.5
PTPN12-215ENST00000522115 NPTX1Q15818 432 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 FASTKD1Q53R41 847 aaKnown RBP3.59□□□□□ -1.83
PTPN12-215ENST00000522115 ERMARDQ5T6L9 678 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 LYSMD4Q5XG99 296 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 NAA16Q6N069 864 aaPredicted RBP3.59□□□□□ -1.83
PTPN12-215ENST00000522115 LEKR1Q6ZMV7 388 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 RBPMS2Q6ZRY4 209 aaKnown RBP3.59□□□□□ -1.83
PTPN12-215ENST00000522115 DET1Q7L5Y6 550 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 LRRTM1Q86UE6 522 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 LGI2Q8N0V4 545 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 LYG1Q8N1E2 194 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 XXYLT1Q8NBI6 393 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 GPRC5AQ8NFJ5 357 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 VANGL1Q8TAA9 524 aaPredicted RBP3.59□□□□□ -1.83
PTPN12-215ENST00000522115 MAPK15Q8TD08 544 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 GTF3AQ92664 365 aaKnown RBP3.59□□□□□ -1.83
PTPN12-215ENST00000522115 ANKRD9Q96BM1 317 aaPredicted RBP3.59□□□□□ -1.83
PTPN12-215ENST00000522115 C18orf12Q96KH6 178 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 C4orf45Q96LM5 186 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 CFAP57Q96MR6 1250 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 NKX3-1Q99801 234 aaPredicted RBP3.59□□□□□ -1.83
PTPN12-215ENST00000522115 UBXN6Q9BZV1 441 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 ZMYND12Q9H0C1 365 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 CDH20Q9HBT6 801 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 CPSF3Q9UKF6 684 aaKnown RBP3.59□□□□□ -1.83
PTPN12-215ENST00000522115 WDR83OSQ9Y284 106 aa3.59□□□□□ -1.83
PTPN12-215ENST00000522115 A0A1B0GVY2 172 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 A0A1W2PPK0 400 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 CASTOR2A6NHX0 329 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 CLDN4O14493 209 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 CD22P20273 847 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 SP100P23497 879 aaPredicted RBP3.58□□□□□ -1.84
PTPN12-215ENST00000522115 EEF1B2P24534 225 aaKnown RBP3.58□□□□□ -1.84
PTPN12-215ENST00000522115 HLA-FP30511 346 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 MMP12P39900 470 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 OPRL1P41146 370 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 HNF4AP41235 474 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 CSE1LP55060 971 aaKnown RBP3.58□□□□□ -1.84
PTPN12-215ENST00000522115 CSNK2BP67870 215 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 ZNF74Q16587 644 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 GLIPR1L2Q4G1C9 344 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 C2CD6Q53TS8 623 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 ARMC4Q5T2S8 1044 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 IL17RELQ6ZVW7 336 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 CENPVQ7Z7K6 275 aaPredicted RBP3.58□□□□□ -1.84
PTPN12-215ENST00000522115 OR4K1Q8NGD4 311 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 OR10Q1Q8NGQ4 319 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 THOC1Q96FV9 657 aaKnown RBP3.58□□□□□ -1.84
PTPN12-215ENST00000522115 FAM71F1Q96KD3 344 aaPredicted RBP3.58□□□□□ -1.84
PTPN12-215ENST00000522115 LINC00615Q96LM1 132 aaPredicted RBP3.58□□□□□ -1.84
PTPN12-215ENST00000522115 ZNF300Q96RE9 604 aaPredicted RBP3.58□□□□□ -1.84
PTPN12-215ENST00000522115 LPAR4Q99677 370 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 MAP3K3Q99759 626 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 CPNE1Q99829 537 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 ANGPTL3Q9Y5C1 460 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 RB1CC1Q8TDY2 1594 aa3.58□□□□□ -1.84
PTPN12-215ENST00000522115 TRBV5-5A0A0J9YX44 114 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 A0A1W2PR80 420 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.57□□□□□ -1.84
PTPN12-215ENST00000522115 EPM2AB3EWF7 344 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 TEX28O15482 410 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 PSMD10O75832 226 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 CEACAM4O75871 244 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 DUS4LO95620 317 aaKnown RBP3.57□□□□□ -1.84
PTPN12-215ENST00000522115 ATP5BP06576 529 aaKnown RBP3.57□□□□□ -1.84
PTPN12-215ENST00000522115 ZSCAN5DPP0CG00 497 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 DARSP14868 501 aaKnown RBP3.57□□□□□ -1.84
PTPN12-215ENST00000522115 AKR1B1P15121 316 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 POLR2LP62875 67 aaKnown RBP3.57□□□□□ -1.84
PTPN12-215ENST00000522115 NFATC2Q13469 925 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 VEZF1Q14119 521 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 SNAI3Q3KNW1 292 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 CFAP58Q5T655 872 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 C6orf163Q5TEZ5 329 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 OR4A47Q6IF82 309 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 DOK6Q6PKX4 331 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 PLPPR4Q7Z2D5 763 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 IQCHQ86VS3 1027 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 RASGEF1AQ8N9B8 481 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 OR6S1Q8NH40 331 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 IWS1Q96ST2 819 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 MED20Q9H944 212 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 KLK13Q9UKR3 277 aa3.57□□□□□ -1.84
PTPN12-215ENST00000522115 TRAV24A0A0B4J272 114 aa3.56□□□□□ -1.84
PTPN12-215ENST00000522115 SOCS3O14543 225 aa3.56□□□□□ -1.84
PTPN12-215ENST00000522115 SPRY1O43609 319 aaPredicted RBP3.56□□□□□ -1.84
PTPN12-215ENST00000522115 CAPZA2P47755 286 aa3.56□□□□□ -1.84
PTPN12-215ENST00000522115 CALD1Q05682 793 aaKnown RBP3.56□□□□□ -1.84
PTPN12-215ENST00000522115 ELAVL2Q12926 359 aaKnown RBP3.56□□□□□ -1.84
PTPN12-215ENST00000522115 RALGDSQ12967 914 aa3.56□□□□□ -1.84
PTPN12-215ENST00000522115 FASTKD3Q14CZ7 662 aaKnown RBP3.56□□□□□ -1.84
PTPN12-215ENST00000522115 NECTIN1Q15223 517 aa3.56□□□□□ -1.84
PTPN12-215ENST00000522115 LETM2Q2VYF4 491 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms