RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 KRT20P35900 424 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 UBXN2AP68543 259 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 PHEXP78562 749 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 NUCB1Q02818 461 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 CALD1Q05682 793 aaKnown RBP3.41□□□□□ -1.86
HDAC2-208ENST00000520746 CCDC6Q16204 474 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 SNAPC1Q16533 368 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 TMEM211Q6ICI0 200 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 C19orf48Q6RUI8 117 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 TRMT1LQ7Z2T5 733 aaKnown RBP3.41□□□□□ -1.86
HDAC2-208ENST00000520746 PRPF39Q86UA1 669 aaKnown RBP3.41□□□□□ -1.86
HDAC2-208ENST00000520746 CRYBG2Q8N1P7 616 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 OR2AJ1Q8NGZ0 328 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 OPTNQ96CV9 577 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 STAMBPL1Q96FJ0 436 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 ZNF354BQ96LW1 612 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 UHRF2Q96PU4 802 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 PLEKHF1Q96S99 279 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 ABHD6Q9BV23 337 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 FNDC11Q9BVV2 318 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 CCDC106Q9BWC9 280 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 EGLN1Q9GZT9 426 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 MMP28Q9H239 520 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 GOLPH3LQ9H4A5 285 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 TFB2MQ9H5Q4 396 aaKnown RBP3.41□□□□□ -1.86
HDAC2-208ENST00000520746 TDRD3Q9H7E2 651 aaKnown RBP3.41□□□□□ -1.86
HDAC2-208ENST00000520746 APOBEC3GQ9HC16 384 aaKnown RBP3.41□□□□□ -1.86
HDAC2-208ENST00000520746 ZNF334Q9HCZ1 680 aaPredicted RBP3.41□□□□□ -1.86
HDAC2-208ENST00000520746 SLC35C2Q9NQQ7 365 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 NKIRAS2Q9NYR9 191 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 TMOD2Q9NZR1 351 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 WBP11Q9Y2W2 641 aaKnown RBP3.41□□□□□ -1.86
HDAC2-208ENST00000520746 TTLL3Q9Y4R7 772 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 TRPM7Q96QT4 1865 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 MED19A0JLT2 244 aaPredicted RBP3.4□□□□□ -1.87
HDAC2-208ENST00000520746 SYNDIG1LA6NDD5 238 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 HEPACAM2A8MVW5 462 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 P4HA2O15460 535 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 TBX6O95947 436 aaPredicted RBP3.4□□□□□ -1.87
HDAC2-208ENST00000520746 NR3C1P04150 777 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 ADRB2P07550 413 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 ACP2P11117 423 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 MSH3P20585 1137 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 ANOS1P23352 680 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 EPHA2P29317 976 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 CDH13P55290 713 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 RPS18P62269 152 aaKnown RBP3.4□□□□□ -1.87
HDAC2-208ENST00000520746 CDK3Q00526 305 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 PRPF4BQ13523 1007 aaKnown RBP3.4□□□□□ -1.87
HDAC2-208ENST00000520746 FCN2Q15485 313 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 NAA16Q6N069 864 aaPredicted RBP3.4□□□□□ -1.87
HDAC2-208ENST00000520746 ANO5Q75V66 913 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 TMEM173Q86WV6 379 aaPredicted RBP3.4□□□□□ -1.87
HDAC2-208ENST00000520746 DEFB123Q8N688 67 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 L3MBTL4Q8NA19 623 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 POMGNT2Q8NAT1 580 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 POGLUT1Q8NBL1 392 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 ZNF473Q8WTR7 871 aaKnown RBP3.4□□□□□ -1.87
HDAC2-208ENST00000520746 DGAT2Q96PD7 388 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 GFRA4Q9GZZ7 299 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 DPAGT1Q9H3H5 408 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 TBC1D17Q9HA65 648 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 ZBTB20Q9HC78 741 aaPredicted RBP3.4□□□□□ -1.87
HDAC2-208ENST00000520746 CD209Q9NNX6 404 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 TAB2Q9NYJ8 693 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 GDE1Q9NZC3 331 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 CRNNQ9UBG3 495 aaPredicted RBP3.4□□□□□ -1.87
HDAC2-208ENST00000520746 GAB2Q9UQC2 676 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 TRPV2Q9Y5S1 764 aa3.4□□□□□ -1.87
HDAC2-208ENST00000520746 UBR2Q8IWV8 1755 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 PRKNO60260 465 aaPredicted RBP3.39□□□□□ -1.87
HDAC2-208ENST00000520746 TSPAN1O60635 241 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 MED24O75448 989 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 SLC22A3O75751 556 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 CAVIN2O95810 425 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 PRSS1P07477 247 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 HOXB7P09629 217 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 CCL5P13501 91 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 IL11P20809 199 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 THOP1P52888 689 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 PRMT2P55345 433 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 DMP1Q13316 513 aaPredicted RBP3.39□□□□□ -1.87
HDAC2-208ENST00000520746 MFAP5Q13361 173 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 KCTD2Q14681 263 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 NR1D2Q14995 579 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 TMEM266Q2M3C6 531 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 CCDC57Q2TAC2 916 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 CBWD6Q4V339 395 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 CBWD3Q5JTY5 395 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 CCNYL2Q5T2Q4 361 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 C6orf163Q5TEZ5 329 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 FAM114A1Q8IWE2 563 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 GPALPP1Q8IXQ4 340 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 OR8H2Q8N162 312 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 LSMEM1Q8N8F7 131 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 PI4KAP1Q8N8J0 262 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 KCTD6Q8NC69 237 aa3.39□□□□□ -1.87
HDAC2-208ENST00000520746 PAPD5Q8NDF8 572 aaKnown RBP3.39□□□□□ -1.87
HDAC2-208ENST00000520746 SECISBP2LQ93073 1101 aaKnown RBP3.39□□□□□ -1.87
HDAC2-208ENST00000520746 SPACA9Q96E40 222 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms