RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 LYSMD4Q5XG99 296 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 OR4A47Q6IF82 309 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 FAM166AQ6J272 317 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 PODNL1Q6PEZ8 512 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 GPR141Q7Z602 305 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 ANKRD46Q86W74 232 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 CCDC83Q8IWF9 413 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 APCDD1Q8J025 514 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 LGI2Q8N0V4 545 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 PHLDA1Q8WV24 401 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 SECTM1Q8WVN6 248 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 SORCS1Q8WY21 1168 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 PYCR2Q96C36 320 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 SLC47A1Q96FL8 570 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 EEF2KMTQ96G04 330 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 GDAP1L1Q96MZ0 367 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 IL17FQ96PD4 163 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 MAP3K3Q99759 626 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 DDX31Q9H8H2 851 aaKnown RBP4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 AKIRIN1Q9H9L7 192 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 LRRC4Q9HBW1 653 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 FGF21Q9NSA1 209 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 PKD2L2Q9NZM6 624 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 APPL1Q9UKG1 709 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 FBXW2Q9UKT8 454 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 ABCC9O60706 1549 aa4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 SPAG9O60271 1321 aaKnown RBP4.91□□□□□ -1.62
HMGB1P46-201ENST00000520062 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 SMIM30A4D0T7 59 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 C2orf81A6NN90 581 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 TULP2O00295 520 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 SLC28A2O43868 658 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 AKAP3O75969 853 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 PPP1R3DO95685 299 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 GP1BBP13224 206 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 PIK3R1P27986 724 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 CDKN2AP42771 156 aaKnown RBP4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 NT5C2P49902 561 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 NME5P56597 212 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 IL10RBQ08334 325 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 LGALS3BPQ08380 585 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 RASGEF1BQ0VAM2 473 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 NONOQ15233 471 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 SGCBQ16585 318 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 LRRC38Q5VT99 294 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 CNSTQ6PJW8 725 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 PRSS55Q6UWB4 352 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 ZNF852Q6ZMS4 543 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 C16orf82Q7Z2V1 217 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 CNTN4Q8IWV2 1026 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 KLHDC8AQ8IYD2 350 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 METTL27Q8N6F8 245 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 OR10Q1Q8NGQ4 319 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 OR52N5Q8NH56 324 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 IGSF21Q96ID5 467 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 LAT2Q9GZY6 243 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 SDCBP2Q9H190 292 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 THAP9Q9H5L6 903 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 TLE6Q9H808 572 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 EVA1AQ9H8M9 152 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 A4GALTQ9NPC4 353 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 CYP39A1Q9NYL5 469 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 RNF7Q9UBF6 113 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 ITM2BQ9Y287 266 aa4.9□□□□□ -1.63
HMGB1P46-201ENST00000520062 LOC101059948A0A1B0GTJ6 334 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 ANKRD61A6NGH8 418 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 PAPSS2O95340 614 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 STAG3L1P0CL83 205 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 P4HA1P13674 534 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 MSH3P20585 1137 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 EFNA1P20827 205 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 CA4P22748 312 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 HTR6P50406 440 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 MAZP56270 477 aaKnown RBP4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 B3GALT5-AS1P59052 145 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 TAF10Q12962 218 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 DMP1Q13316 513 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 TAF13Q15543 124 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 PARP10Q53GL7 1025 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 CCNYL2Q5T2Q4 361 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 FAM46CQ5VWP2 391 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 C9orf57Q5W0N0 161 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 RAB12Q6IQ22 244 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 ARMC9Q7Z3E5 817 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 ZNF575Q86XF7 245 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 PEX5LQ8IYB4 626 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 NAGSQ8N159 534 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 ZNF619Q8N2I2 560 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 C5orf30Q96GV9 206 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 MED30Q96HR3 178 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 PANX3Q96QZ0 392 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 GAL3ST4Q96RP7 486 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 URM1Q9BTM9 101 aaKnown RBP4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 OSBPL8Q9BZF1 889 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 UBQLN3Q9H347 655 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 PELI2Q9HAT8 420 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 CHST11Q9NPF2 352 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 SDR39U1Q9NRG7 319 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 GPR173Q9NS66 373 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 AKAP7Q9P0M2 348 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms