RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PDCD4Q53EL6 469 aaKnown RBP14.03□□□□□ -0.16
CLN8-204ENST00000519254 LYSMD4Q5XG99 296 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 METRNLQ641Q3 311 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 BLOC1S3Q6QNY0 202 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 AGTRAPQ6RW13 159 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 RETREG3Q86VR2 466 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 MYLK4Q86YV6 388 aaPredicted RBP14.03□□□□□ -0.16
CLN8-204ENST00000519254 KLHDC8AQ8IYD2 350 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 FNDC5Q8NAU1 212 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 FBXO15Q8NCQ5 510 aaPredicted RBP14.03□□□□□ -0.16
CLN8-204ENST00000519254 CCL4L1Q8NHW4 92 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 CCDC124Q96CT7 223 aaKnown RBP14.03□□□□□ -0.16
CLN8-204ENST00000519254 OR52A5Q9H2C5 316 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 TCEAL2Q9H3H9 227 aaPredicted RBP14.03□□□□□ -0.16
CLN8-204ENST00000519254 GPR27Q9NS67 375 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 INTS7Q9NVH2 962 aaKnown RBP14.03□□□□□ -0.16
CLN8-204ENST00000519254 ZNF490Q9ULM2 529 aaPredicted RBP14.03□□□□□ -0.16
CLN8-204ENST00000519254 POMPQ9Y244 141 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 CFAP20Q9Y6A4 193 aaKnown RBP14.03□□□□□ -0.16
CLN8-204ENST00000519254 ZDBF2Q9HCK1 2354 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 PDZK1P1A8MUH7 402 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 SLC28A1O00337 649 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 HRO43593 1189 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 TNFP01375 233 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 ACADLP28330 430 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 CSNK1EP49674 416 aaKnown RBP14.02□□□□□ -0.16
CLN8-204ENST00000519254 PSME3P61289 254 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 UFM1P61960 85 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 CTBSQ01459 385 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 RPA4Q13156 261 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 CEACAM7Q14002 265 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 CPSF6Q16630 551 aaKnown RBP eCLIP14.02□□□□□ -0.16
CLN8-204ENST00000519254 AP5B1Q2VPB7 878 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 VPS26BQ4G0F5 336 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 RFTN2Q52LD8 501 aaPredicted RBP14.02□□□□□ -0.16
CLN8-204ENST00000519254 SGO1Q5FBB7 561 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 PMS2CLQ68D20 193 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 C8orf82Q6P1X6 216 aaPredicted RBP14.02□□□□□ -0.16
CLN8-204ENST00000519254 SLC30A9Q6PML9 568 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 HACD2Q6Y1H2 254 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 CEP68Q76N32 757 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 PDZD3Q86UT5 571 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 PARGQ86W56 976 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 FAM174AQ8TBP5 190 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 ATL1Q8WXF7 558 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 DPEP2Q9H4A9 486 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 MAP10Q9P2G4 905 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 KLF15Q9UIH9 416 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 LRP4O75096 1905 aa14.02□□□□□ -0.16
CLN8-204ENST00000519254 KLHL33A6NCF5 533 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 BBIP1A8MTZ0 92 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 TLR4O00206 839 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 IFRD1O00458 451 aaPredicted RBP14.01□□□□□ -0.17
CLN8-204ENST00000519254 BCAT2O15382 392 aaPredicted RBP14.01□□□□□ -0.17
CLN8-204ENST00000519254 RGS14O43566 566 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 SLC16A8O95907 504 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 GNAZP19086 355 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 IDSP22304 550 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 IMPA1P29218 277 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 IL12AP29459 219 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 ACTR1BP42025 376 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 ERFP50548 548 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 ACTR1AP61163 376 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 DMPKQ09013 629 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 NAE1Q13564 534 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 CCNIQ14094 377 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 RCN1Q15293 331 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 BMP8AQ7Z5Y6 402 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 THOC6Q86W42 341 aaKnown RBP14.01□□□□□ -0.17
CLN8-204ENST00000519254 OR56A3Q8NH54 315 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 C1orf216Q8TAB5 229 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 DNASE2BQ8WZ79 361 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 MTFMTQ96DP5 389 aaKnown RBP14.01□□□□□ -0.17
CLN8-204ENST00000519254 PPP3R2Q96LZ3 170 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 SERPINI1Q99574 410 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 PRDM8Q9NQV8 689 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 ZIM2Q9NZV7 527 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 ACSL5Q9ULC5 683 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 ASF1AQ9Y294 204 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 WDR37Q9Y2I8 494 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 NDUFAF1Q9Y375 327 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 E7ENX8 843 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 SLC22A3O75751 556 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 PDYNP01213 254 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 KRT6AP02538 564 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 KRT6BP04259 564 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 KRT6CP48668 564 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 C21orf59P57076 290 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 HMGCS1Q01581 520 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 RCAN2Q14206 197 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 ANGPT1Q15389 498 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 SMU1Q2TAY7 513 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 PLK5Q496M5 336 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 IL23RQ5VWK5 629 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 DUS1LQ6P1R4 473 aaKnown RBP14.01□□□□□ -0.17
CLN8-204ENST00000519254 C11orf74Q86VG3 221 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 IQCHQ86VS3 1027 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 DCP2Q8IU60 420 aaKnown RBP14.01□□□□□ -0.17
CLN8-204ENST00000519254 HOMEZQ8IX15 550 aa14.01□□□□□ -0.17
CLN8-204ENST00000519254 PHACTR4Q8IZ21 702 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms