RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 TTC41PQ6P2S7 1318 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 TECTAO75443 2155 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 MAGEA13PA6NCF6 341 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 MAGEB17A8MXT2 336 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 LACTBL1A8MY62 500 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 ZNF587BE7ETH6 402 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 J3QR06 171 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 DDX39AO00148 427 aaKnown RBP4.22□□□□□ -1.73
LINC00534-201ENST00000517400 NDUFS4O43181 175 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 MMP1P03956 469 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 DNTTP04053 509 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 SCG2P13521 617 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 DNAJB1P25685 340 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 CCKBRP32239 447 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 TCF7P36402 384 aaPredicted RBP4.22□□□□□ -1.73
LINC00534-201ENST00000517400 USP8P40818 1118 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 LIG4P49917 911 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 CTSCP53634 463 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 SIRPAP78324 504 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 ZXDBP98169 803 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 PPP2R2BQ00005 443 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 SF3B4Q15427 424 aaKnown RBP eCLIP4.22□□□□□ -1.739e-6■■■■■ 27.7
LINC00534-201ENST00000517400 KIF19Q2TAC6 998 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 MCMDC2Q4G0Z9 681 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 ZDHHC20Q5W0Z9 365 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 DHRS7BQ6IAN0 325 aaPredicted RBP4.22□□□□□ -1.73
LINC00534-201ENST00000517400 SLC30A6Q6NXT4 461 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 CWC27Q6UX04 472 aaKnown RBP4.22□□□□□ -1.73
LINC00534-201ENST00000517400 ASCL5Q7RTU5 278 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 SATL1Q86VE3 508 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 SLC5A8Q8N695 610 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 POMGNT2Q8NAT1 580 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 SMRP1Q8NCR6 262 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 SLC20A1Q8WUM9 679 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 BICD1Q96G01 975 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 MED30Q96HR3 178 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 ADGRG7Q96K78 797 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 MARK4Q96L34 752 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 NEK1Q96PY6 1258 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 WACQ9BTA9 647 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 KLHL4Q9C0H6 718 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 SLCO5A1Q9H2Y9 848 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 AZI2Q9H6S1 392 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 UBTD1Q9HAC8 227 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 RCC2Q9P258 522 aaKnown RBP4.22□□□□□ -1.73
LINC00534-201ENST00000517400 LARSQ9P2J5 1176 aaKnown RBP4.22□□□□□ -1.73
LINC00534-201ENST00000517400 PPIEQ9UNP9 301 aaKnown RBP4.22□□□□□ -1.73
LINC00534-201ENST00000517400 PCDHGA5Q9Y5G8 931 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 SIP14410 1827 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 FRYLO94915 3013 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 LCTP09848 1927 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 PTPRSQ13332 1948 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 EPG5Q9HCE0 2579 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 DOCK7Q96N67 2140 aa4.22□□□□□ -1.73
LINC00534-201ENST00000517400 EP300Q09472 2414 aaPredicted RBP4.22□□□□□ -1.73
LINC00534-201ENST00000517400 MICAL3Q7RTP6 2002 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 hCG_1809904A0A1W2PP81 198 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 A0A1W2PPE2 198 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 A0A1W2PR64 198 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 ERICH2A1L162 156 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 PRR23AA6NEV1 266 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 A6NL46 340 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 HAS3O00219 553 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 IFIT3O14879 490 aaKnown RBP4.21□□□□□ -1.74
LINC00534-201ENST00000517400 ZBTB5O15062 677 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 CHRNA1P02708 482 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 STAG3L1P0CL83 205 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 T-ENOLP0DO92 83 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 MYOD1P15172 320 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 NR2F2P24468 414 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 NMBRP28336 390 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 MRPS6P82932 125 aaKnown RBP4.21□□□□□ -1.74
LINC00534-201ENST00000517400 SLC20A2Q08357 652 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 TRDNQ13061 729 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 HNRNPA0Q13151 305 aaKnown RBP4.21□□□□□ -1.74
LINC00534-201ENST00000517400 SNTA1Q13424 505 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 KRT33BQ14525 404 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 IMMTQ16891 758 aaKnown RBP4.21□□□□□ -1.74
LINC00534-201ENST00000517400 SPECC1Q5M775 1068 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 RPUSD3Q6P087 351 aaKnown RBP4.21□□□□□ -1.74
LINC00534-201ENST00000517400 METTL7BQ6UX53 244 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 GFRALQ6UXV0 394 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 ZNF704Q6ZNC4 412 aaPredicted RBP4.21□□□□□ -1.74
LINC00534-201ENST00000517400 Q75L30 129 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 HAUS6Q7Z4H7 955 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 LDB1Q86U70 411 aaPredicted RBP4.21□□□□□ -1.74
LINC00534-201ENST00000517400 TMEM219Q86XT9 240 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 GALNT13Q8IUC8 556 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 MAP7D3Q8IWC1 876 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 METTL13Q8N6R0 699 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 TDRD5Q8NAT2 981 aaKnown RBP4.21□□□□□ -1.74
LINC00534-201ENST00000517400 POGLUT1Q8NBL1 392 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 KCTD6Q8NC69 237 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 LILRB1Q8NHL6 650 aaPredicted RBP4.21□□□□□ -1.74
LINC00534-201ENST00000517400 SLC44A1Q8WWI5 657 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 FIG4Q92562 907 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 THOC3Q96J01 351 aaKnown RBP4.21□□□□□ -1.74
LINC00534-201ENST00000517400 SLC22A12Q96S37 553 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 SMC6Q96SB8 1091 aa4.21□□□□□ -1.74
LINC00534-201ENST00000517400 CDRT15Q96T59 188 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms