RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 SCO2O43819 266 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 ATP9AO75110 1047 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 SMIM18P0DKX4 95 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 HNRNPCL4P0DMR1 293 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 GAP43P17677 238 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 MAPK3P27361 379 aaPredicted RBP3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 PIK3R1P27986 724 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 CTNNB1P35222 781 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 MNDAP41218 407 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 LUMP51884 338 aaPredicted RBP3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 CASP9P55211 416 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 UCP2P55851 309 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 SULT2A1Q06520 285 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 ZNF415Q09FC8 603 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 ZBTB17Q13105 803 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 TSTA3Q13630 321 aaPredicted RBP3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 RBBP7Q16576 425 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 PHKG1Q16816 387 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 ZNF260Q3ZCT1 412 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 ASPRV1Q53RT3 343 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 AGAP6Q5VW22 663 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 OR4A47Q6IF82 309 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 NEK5Q6P3R8 708 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 PLD3Q8IV08 490 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 CCDC60Q8IWA6 550 aaPredicted RBP3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 AQP12AQ8IXF9 295 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 CFAP206Q8IYR0 622 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 APCDD1Q8J025 514 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 ZNF441Q8N8Z8 693 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 RNASE8Q8TDE3 154 aaKnown RBP3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 UBLCP1Q8WVY7 318 aaPredicted RBP3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 LINGO1Q96FE5 620 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 ADGRG7Q96K78 797 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 RUFY1Q96T51 708 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 SEZ6LQ9BYH1 1024 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 PRRG4Q9BZD6 226 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 P2RY12Q9H244 342 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 HSD3B7Q9H2F3 369 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 TMEM245Q9H330 911 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 TRPC7Q9HCX4 862 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 CD93Q9NPY3 652 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 FGF21Q9NSA1 209 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 NOCTQ9UK39 431 aaKnown RBP3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 PIN4Q9Y237 131 aaKnown RBP3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 ATP6V0A2Q9Y487 856 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 IL16Q14005 1332 aa3.09□□□□□ -1.91
RNU6-840P-201ENST00000517275 IGHV4OR15-8A0A075B7B6 117 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 A0A087X0K7 114 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 A0A0A6YYC8 382 aaPredicted RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 ASPDHA6ND91 283 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 C5orf51A6NDU8 294 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 C17orf105B2RV13 164 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 H3BNX3 289 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 I3L1I5 382 aaPredicted RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 CACNB4O00305 520 aaPredicted RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 NME6O75414 186 aaPredicted RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 PRDM1O75626 825 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 BAG3O95817 575 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 ALPPP05187 535 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 ANKRD34CP0C6C1 535 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 ALPPL2P10696 532 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 PCP11498 1178 aaKnown RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 FGF5P12034 268 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 CDH1P12830 882 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 EFNA1P20827 205 aaPredicted RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 HOXA1P49639 335 aaPredicted RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 SERPINH1P50454 418 aaKnown RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 GPC3P51654 580 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 MAZP56270 477 aaKnown RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 NME5P56597 212 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 NANOS3P60323 173 aaKnown RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 AKAP17AQ02040 695 aaKnown RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 GAMTQ14353 236 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 CCDC6Q16204 474 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 ITPRIPL2Q3MIP1 535 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 FAM46CQ5VWP2 391 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 ZNF425Q6IV72 752 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 FAM171BQ6P995 826 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 ZNF554Q86TJ5 538 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 ANKRD46Q86W74 232 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 SFR1Q86XK3 245 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 NOA1Q8NC60 698 aaKnown RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 SMRP1Q8NCR6 262 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 CNNM3Q8NE01 707 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 OR11H4Q8NGC9 324 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 ZNF473Q8WTR7 871 aaKnown RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 PHLDA1Q8WV24 401 aaPredicted RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 TMED6Q8WW62 240 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 ASB5Q8WWX0 329 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 HSD17B8Q92506 261 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 PIGBQ92521 554 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 TMEM186Q96B77 213 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 PYCR2Q96C36 320 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 AP2M1Q96CW1 435 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 CDKN2AIPNLQ96HQ2 116 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 ZNF48Q96MX3 618 aaPredicted RBP3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 TSSK2Q96PF2 358 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 C17orf62Q9BQA9 187 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 LAT2Q9GZY6 243 aa3.08□□□□□ -1.92
RNU6-840P-201ENST00000517275 MIS12Q9H081 205 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms