RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	SNRNP48	Q6IEG0	339 aa	Known RBP	4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	GTF2H2C	Q6P1K8	395 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	KRTAP7-1	Q8IUC3	87 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	CCDC170	Q8IYT3	715 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	CNPY4	Q8N129	248 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	CEP112	Q8N8E3	955 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	ZNF248	Q8NDW4	579 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	OR8K1	Q8NGG5	319 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	ACER1	Q8TDN7	264 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	ZNF524	Q96C55	264 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	PCYT2	Q99447	389 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	CHP1	Q99653	195 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	SLF1	Q9BQI6	1058 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	MTG1	Q9BT17	334 aa	Predicted RBP	4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	FGFBP2	Q9BYJ0	223 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	INTS2	Q9H0H0	1204 aa	Known RBP	4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	NT5C3A	Q9H0P0	336 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	VCPKMT	Q9H867	229 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	MMP25	Q9NPA2	562 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	MED4	Q9NPJ6	270 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	HINT3	Q9NQE9	182 aa	Known RBP	4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	AGPAT5	Q9NUQ2	364 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	BEX4	Q9NWD9	120 aa	Predicted RBP	4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	TRIM10	Q9UDY6	481 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	RSPH14	Q9UHP6	348 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	ERVK-11	Q9UQG0	969 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	DLGAP4	Q9Y2H0	992 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	ASTN1	O14525	1302 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	UBE4B	O95155	1302 aa		4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.18	□□□□□ -1.74
RUFY3-215	ENST00000515479	MAP1B	P46821	2468 aa	Known RBP	4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	MYO10	Q9HD67	2058 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	MYO15A	Q9UKN7	3530 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	IGLV3-22	A0A075B6J6	115 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	MAP2K7	O14733	419 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	NBN	O60934	754 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	MED24	O75448	989 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	SEC31A	O94979	1220 aa	Known RBP	4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	TUBB	P07437	444 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	PAX1	P15863	534 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	TRIM21	P19474	475 aa	Known RBP	4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	CALR	P27797	417 aa	Known RBP	4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	CYLC1	P35663	651 aa	Predicted RBP	4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	SLC1A4	P43007	532 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	MTIF2	P46199	727 aa	Known RBP	4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	MRPL12	P52815	198 aa	Known RBP	4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	TUBB4B	P68371	445 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	SET	Q01105	290 aa	Predicted RBP	4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	ASTE1	Q2TB18	679 aa	Predicted RBP	4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	CCNYL2	Q5T2Q4	361 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	TXNDC8	Q6A555	127 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	HIST2H2BD	Q6DRA6	164 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	TMCO3	Q6UWJ1	677 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	BBS12	Q6ZW61	710 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	LRRC8D	Q7L1W4	858 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	RRM2B	Q7LG56	351 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	MYOCD	Q8IZQ8	938 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	OLIG1	Q8TAK6	271 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	SCFD1	Q8WVM8	642 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	JAKMIP2	Q96AA8	810 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	LGALS12	Q96DT0	336 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	RTP3	Q9BQQ7	232 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	FUT8	Q9BYC5	575 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	PARD6B	Q9BYG5	372 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	EDEM3	Q9BZQ6	932 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	TSGA10	Q9BZW7	698 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	TKTL2	Q9H0I9	626 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	GAN	Q9H2C0	597 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	PSTPIP2	Q9H939	334 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	VAT1L	Q9HCJ6	419 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	NENF	Q9UMX5	172 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	ATG2A	Q2TAZ0	1938 aa		4.17	□□□□□ -1.74
RUFY3-215	ENST00000515479	WDR87	Q6ZQQ6	2873 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	EP300	Q09472	2414 aa	Predicted RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	FANCM	Q8IYD8	2048 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	NCOR2	Q9Y618	2525 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	IGKV3D-20	A0A0C4DH25	116 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	TEX13C	A0A0J9YWL9	993 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479		A0A1W2PRG0	241 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	CTAGE15	A4D2H0	777 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	LRRC53	A6NM62	1247 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479		E9PMD0	336 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	FAM86B1	E9PN63	330 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479		H3BQF6	201 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	ATP2A1	O14983	1001 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	NOL4	O94818	638 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	FGFR1OP	O95684	399 aa	Known RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	CXCL10	P02778	98 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	INHBA	P08476	426 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	PLEK	P08567	350 aa	Predicted RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	FAM86B2	P0C5J1	330 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	PLA2G4B	P0C869	781 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	CTAGE8	P0CG41	777 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	RPA1	P27694	616 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	HOXD13	P35453	343 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	PSMC6	P62333	389 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	VSNL1	P62760	191 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	KRT83	P78385	493 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms