RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 MANFP55145 182 aaKnown RBP12.83□□□□□ -0.36
TCOF1-213ENST00000514442 C2orf27AQ580R0 203 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 ANKRD46Q86W74 232 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 Q96MT0 163 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 INIPQ9NRY2 104 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 ENPP5Q9UJA9 477 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 LYVE1Q9Y5Y7 322 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 A0A0D9SEW6 157 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 PLD2O14939 933 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 SDC2P34741 201 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 LGALS3BPQ08380 585 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 GALNT13Q8IUC8 556 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 ZNF461Q8TAF7 563 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 ACDQ96AP0 544 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 CDKN2AIPNLQ96HQ2 116 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 FRMD6Q96NE9 622 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 CNPPD1Q9BV87 410 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 SUV39H2Q9H5I1 410 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 PDLIM7Q9NR12 457 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 OLAHQ9NV23 265 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 GULP1Q9UBP9 304 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 HSPB11Q9Y547 144 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 ITGB4P16144 1822 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 UROSP10746 265 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 IDSP22304 550 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 HTRA3P83110 453 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 TEAD2Q15562 447 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 CLPPQ16740 277 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-213ENST00000514442 TRNT1Q96Q11 434 aaKnown RBP12.83□□□□□ -0.36
TCOF1-213ENST00000514442 STRA6Q9BX79 667 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 EQTNQ9NQ60 294 aa12.83□□□□□ -0.36
TCOF1-213ENST00000514442 FABP12A6NFH5 140 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 ACOX3O15254 700 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 DLX3O60479 287 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 GJB5O95377 273 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 RPL3P39023 403 aaKnown RBP12.82□□□□□ -0.36
TCOF1-213ENST00000514442 NSG1P42857 185 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 GSTM5P46439 218 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 SPIBQ01892 262 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 DEF8Q6ZN54 512 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 EPHX4Q8IUS5 362 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 MFSD2AQ8NA29 543 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 AIF1LQ9BQI0 150 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 FLRT1Q9NZU1 646 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 RNF6Q9Y252 685 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 OR10H1Q9Y4A9 318 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 TAF1P21675 1872 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 INPPL1O15357 1258 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 AHSGP02765 367 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 BUD31P41223 144 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-213ENST00000514442 DESI1Q6ICB0 168 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 DHRS4L2Q6PKH6 230 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 GRASPQ7Z6J2 395 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-213ENST00000514442 LILRA2Q8N149 483 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 OR9I1Q8NGQ6 314 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 CTRCQ99895 268 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 RNF11Q9Y3C5 154 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 SLC28A2O43868 658 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 COL6A1P12109 1028 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 PAICSP22234 425 aaKnown RBP12.82□□□□□ -0.36
TCOF1-213ENST00000514442 KELP23276 732 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 KIR3DL1P43629 444 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 RORCP51449 518 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 MAB21L1Q13394 359 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 IL18Q14116 193 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 PNCKQ6P2M8 343 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 CACTIN-AS1Q8N1I8 211 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 ADAMTS16Q8TE57 1224 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 HERVK_113Q902F9 699 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 PYCR2Q96C36 320 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 PTPN18Q99952 460 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 ABCB9Q9NP78 766 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 PCDHGA7Q9Y5G6 932 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 TUBGCP6Q96RT7 1819 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 MYH4Q9Y623 1939 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 DNAJC25-GNG10A0A024R161 153 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 ADAM23O75077 832 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 HPRP00739 348 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 EDN1P05305 212 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 MATN1P21941 496 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 PSMA1P25786 263 aaKnown RBP12.82□□□□□ -0.36
TCOF1-213ENST00000514442 RPL10P27635 214 aaKnown RBP12.82□□□□□ -0.36
TCOF1-213ENST00000514442 GKP32189 559 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 CCR10P46092 362 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 ATP4BP51164 291 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 GNA13Q14344 377 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 ANXA8L1Q5VT79 327 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 SNX20Q7Z614 316 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 TMCO2Q7Z6W1 182 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-213ENST00000514442 PLD6Q8N2A8 252 aaKnown RBP12.82□□□□□ -0.36
TCOF1-213ENST00000514442 LIX1Q8N485 282 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 TMEM102Q8N9M5 508 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-213ENST00000514442 AKAP1Q92667 903 aaKnown RBP eCLIP12.82□□□□□ -0.36
TCOF1-213ENST00000514442 LGALS12Q96DT0 336 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 IGSF21Q96ID5 467 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 ZNF599Q96NL3 588 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 CRISPLD1Q9H336 500 aa12.82□□□□□ -0.36
TCOF1-213ENST00000514442 CLDN7O95471 211 aa12.81□□□□□ -0.36
TCOF1-213ENST00000514442 GNAO1P09471 354 aa12.81□□□□□ -0.36
TCOF1-213ENST00000514442 ANXA4P09525 319 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms