RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 ABHD6Q9BV23 337 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 TRIM7Q9C029 511 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 GPR88Q9GZN0 384 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 TMEM206Q9H813 350 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 APOBEC3GQ9HC16 384 aaKnown RBP3.64□□□□□ -1.83
CAST-229ENST00000510098 FANCFQ9NPI8 374 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 EQTNQ9NQ60 294 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 OSER1Q9NX31 292 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 DPP3Q9NY33 737 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 AATFQ9NY61 560 aaKnown RBP eCLIP3.64□□□□□ -1.83
CAST-229ENST00000510098 CYP39A1Q9NYL5 469 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 ERAP1Q9NZ08 941 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 TRPC4Q9UBN4 977 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 IL17BQ9UHF5 180 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 SLC24A2Q9UI40 661 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 EXOC7Q9UPT5 735 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 RPH3AQ9Y2J0 694 aaPredicted RBP3.64□□□□□ -1.83
CAST-229ENST00000510098 JRKLQ9Y4A0 524 aa3.64□□□□□ -1.83
CAST-229ENST00000510098 A0A1W2PPI3 338 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 CLRN2A0PK11 232 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 SLC9B1P1A6NJY1 282 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 HEPACAM2A8MVW5 462 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 FAM86B1E9PN63 330 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 SLC30A4O14863 429 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 IFNB1P01574 187 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 GBAP04062 536 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 ALPPP05187 535 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 ALPPL2P10696 532 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 UROSP10746 265 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 GHRP10912 638 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 ARF4P18085 180 aaPredicted RBP3.63□□□□□ -1.83
CAST-229ENST00000510098 ACHEP22303 614 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 CBLP22681 906 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 RABIFP47224 123 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 ARFIP1P53367 373 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 ILF3Q12906 894 aaKnown RBP eCLIP3.63□□□□□ -1.83
CAST-229ENST00000510098 MFAP5Q13361 173 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 PPIGQ13427 754 aaKnown RBP eCLIP3.63□□□□□ -1.83
CAST-229ENST00000510098 KIR2DS3Q14952 304 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 PDK1Q15118 436 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 CEP55Q53EZ4 464 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 C6orf136Q5SQH8 315 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 KRT39Q6A163 491 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 C15orf39Q6ZRI6 1047 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 RGS9BPQ6ZS82 235 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 TMPRSS11FQ6ZWK6 438 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 KCTD9Q7L273 389 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 ZNF329Q86UD4 541 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 NFE4Q86UQ8 179 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 GPALPP1Q8IXQ4 340 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 ZNF595Q8IYB9 648 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 CLYBLQ8N0X4 340 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 CRYBG2Q8N1P7 616 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 LPCAT1Q8NF37 534 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 SLC24A4Q8NFF2 622 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 GRAPLQ8TC17 118 aaPredicted RBP3.63□□□□□ -1.83
CAST-229ENST00000510098 CTNNBL1Q8WYA6 563 aaPredicted RBP3.63□□□□□ -1.83
CAST-229ENST00000510098 PRCCQ92733 491 aaPredicted RBP3.63□□□□□ -1.83
CAST-229ENST00000510098 EEF2KMTQ96G04 330 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 RMDN2Q96LZ7 410 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 PARK7Q99497 189 aaKnown RBP3.63□□□□□ -1.83
CAST-229ENST00000510098 SEPHS2Q99611 448 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 TXN2Q99757 166 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 LMF2Q9BU23 707 aaKnown RBP3.63□□□□□ -1.83
CAST-229ENST00000510098 CACNG6Q9BXT2 260 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 OLFML3Q9NRN5 406 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 IARS2Q9NSE4 1012 aaKnown RBP3.63□□□□□ -1.83
CAST-229ENST00000510098 OLAHQ9NV23 265 aa3.63□□□□□ -1.83
CAST-229ENST00000510098 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 TEX13DA0A0J9YY54 714 aaPredicted RBP3.62□□□□□ -1.83
CAST-229ENST00000510098 HYKKA2RU49 373 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 TMEM110-MUSTN1A8MSY1 372 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 CLIC2O15247 247 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 RIPK2O43353 540 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 GRID2O43424 1007 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 SPRY1O43609 319 aaPredicted RBP3.62□□□□□ -1.83
CAST-229ENST00000510098 FGF17O60258 216 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 TSC22D2O75157 780 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 LETM1O95202 739 aaPredicted RBP3.62□□□□□ -1.83
CAST-229ENST00000510098 VIMP08670 466 aaKnown RBP3.62□□□□□ -1.83
CAST-229ENST00000510098 LINGO3P0C6S8 592 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 FAM58BPP0C7Q3 252 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 OR2T7P0C7T2 308 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 ACP2P11117 423 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 SFTPCP11686 197 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 PCGF2P35227 344 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 SLC9A3P48764 834 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 HNMTP50135 292 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 NAGLUP54802 743 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 NME5P56597 212 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 ST8SIA6P61647 398 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 TAZQ16635 292 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 MDH1BQ5I0G3 518 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 RNASEH2BQ5TBB1 312 aaKnown RBP3.62□□□□□ -1.83
CAST-229ENST00000510098 FAM91A1Q658Y4 838 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 MEX3BQ6ZN04 569 aaKnown RBP3.62□□□□□ -1.83
CAST-229ENST00000510098 CENPVQ7Z7K6 275 aaPredicted RBP3.62□□□□□ -1.83
CAST-229ENST00000510098 MAML2Q8IZL2 1156 aaPredicted RBP3.62□□□□□ -1.83
CAST-229ENST00000510098 SFRP1Q8N474 314 aa3.62□□□□□ -1.83
CAST-229ENST00000510098 ZNF473Q8WTR7 871 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms