RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CLCN7P51798 805 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 PGGT1BP53609 377 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 MPP1Q00013 466 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 CUL1Q13616 776 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 TMED2Q15363 201 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 SF1Q15637 639 aaKnown RBP10.44□□□□□ -0.74
RNF4-212ENST00000509258 PLEKHN1Q494U1 663 aaPredicted RBP10.44□□□□□ -0.74
RNF4-212ENST00000509258 NKAIN1Q4KMZ8 207 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 MSS51Q4VC12 460 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 ZC3H12BQ5HYM0 836 aaKnown RBP10.44□□□□□ -0.74
RNF4-212ENST00000509258 YOD1Q5VVQ6 348 aaPredicted RBP10.44□□□□□ -0.74
RNF4-212ENST00000509258 ZNF470Q6ECI4 717 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 NEPROQ6NW34 567 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 CCDC137Q6PK04 289 aaKnown RBP10.44□□□□□ -0.74
RNF4-212ENST00000509258 SUSD1Q6UWL2 747 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 OTOAQ7RTW8 1153 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 ZADH2Q8N4Q0 377 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 OR2L3Q8NG85 312 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 OR2A1Q8NGT9 310 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 OR2Y1Q8NGV0 311 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 ZNF285Q96NJ3 590 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 PANX3Q96QZ0 392 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 OSBPL9Q96SU4 736 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 RAB11FIP5Q9BXF6 653 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 ZBTB20Q9HC78 741 aaPredicted RBP10.44□□□□□ -0.74
RNF4-212ENST00000509258 ATP13A2Q9NQ11 1180 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 ASF1BQ9NVP2 202 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.44□□□□□ -0.74
RNF4-212ENST00000509258 SLC17A6Q9P2U8 582 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 SLC5A6Q9Y289 635 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 JRKLQ9Y4A0 524 aa10.44□□□□□ -0.74
RNF4-212ENST00000509258 FAM237BA0A1B0GVD1 139 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 ANKUB1A6NFN9 424 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 FANCGO15287 622 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 FKBP9O95302 570 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 CLDN1O95832 211 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 PKMP14618 531 aaKnown RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 OGNP20774 298 aaKnown RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 DCTP40126 519 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 SLC1A2P43004 574 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 OR1D4P47884 311 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 VSX2P58304 361 aaPredicted RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 DHX34Q14147 1143 aaKnown RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 KLHL38Q2WGJ6 581 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 TCTE1Q5JU00 501 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 RNASEH2BQ5TBB1 312 aaKnown RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 ZNF787Q6DD87 383 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 MRNIPQ6NTE8 343 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 CASC4Q6P4E1 433 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 SHISA6Q6ZSJ9 500 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 TTLL10Q6ZVT0 673 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 LRRC6Q86X45 466 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 IGDCC3Q8IVU1 814 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 CISD2Q8N5K1 135 aaKnown RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 TTC29Q8NA56 475 aaPredicted RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 PPFIBP2Q8ND30 876 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 MCUQ8NE86 351 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 HMGCLL1Q8TB92 370 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 SKA2Q8WVK7 121 aaPredicted RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 FKBP10Q96AY3 582 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 RAD51AP1Q96B01 352 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 PBKQ96KB5 322 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 PWWP2AQ96N64 755 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 PKP4Q99569 1192 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 WDR83Q9BRX9 315 aaKnown RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 ACAT2Q9BWD1 397 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 ZNF552Q9H707 407 aaPredicted RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 AGPAT4Q9NRZ5 378 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 P4HTMQ9NXG6 502 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 TRMT1Q9NXH9 659 aaKnown RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 CTSFQ9UBX1 484 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 NXT1Q9UKK6 140 aaKnown RBP10.43□□□□□ -0.74
RNF4-212ENST00000509258 SLC39A10Q9ULF5 831 aa10.43□□□□□ -0.74
RNF4-212ENST00000509258 POLEQ07864 2286 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 A0A0J9YVX5 310 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 SDR42E2A6NKP2 422 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 MYO1CO00159 1063 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 AP3B1O00203 1094 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 PGRMC1O00264 195 aaKnown RBP10.42□□□□□ -0.74
RNF4-212ENST00000509258 FFAR3O14843 346 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 GPR42O15529 346 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 PHF2O75151 1096 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 PSIP1O75475 530 aaKnown RBP10.42□□□□□ -0.74
RNF4-212ENST00000509258 ONECUT2O95948 504 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 ALBP02768 609 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 ESR1P03372 595 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 ALAS2P22557 587 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 GABRB3P28472 473 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 EFNA3P52797 238 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 ADARP55265 1226 aaKnown RBP10.42□□□□□ -0.74
RNF4-212ENST00000509258 SOX8P57073 446 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 AIMP2Q13155 320 aaKnown RBP10.42□□□□□ -0.74
RNF4-212ENST00000509258 NAA25Q14CX7 972 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 FBXO42Q6P3S6 717 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 CYHR1Q6ZMK1 362 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 Q6ZS92 163 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 RNF44Q7L0R7 432 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 LRRC56Q8IYG6 542 aaPredicted RBP10.42□□□□□ -0.74
RNF4-212ENST00000509258 MAGEC3Q8TD91 643 aa10.42□□□□□ -0.74
RNF4-212ENST00000509258 INPP5DQ92835 1189 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms