RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ABRAXAS1Q6UWZ7 409 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 LIPIQ6XZB0 460 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 LRRC70Q7Z2Q7 622 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 FAM162AQ96A26 154 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 C19orf43Q9BQ61 176 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 KAT8Q9H7Z6 458 aaKnown RBP14.07□□□□□ -0.16
DDX41-208ENST00000507955 GULP1Q9UBP9 304 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 ZNF639Q9UID6 485 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 VPS4AQ9UN37 437 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 SNX6Q9UNH7 406 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 GMEB1Q9Y692 573 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 MTCL1Q9Y4B5 1905 aaKnown RBP14.07□□□□□ -0.16
DDX41-208ENST00000507955 CEP290O15078 2479 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 ELOVL7A1L3X0 281 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 GRXCR1A8MXD5 290 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 CXCR6O00574 342 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 YY2O15391 372 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 CYP17A1P05093 508 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 UMPSP11172 480 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 ELK4P28324 431 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 MAPK10P53779 464 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 TMEM115Q12893 351 aaPredicted RBP14.06□□□□□ -0.16
DDX41-208ENST00000507955 C16orf72Q14CZ0 275 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 LAPTM4AQ15012 233 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 TMC5Q6UXY8 1006 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 KCTD8Q6ZWB6 473 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 THOC6Q86W42 341 aaKnown RBP14.06□□□□□ -0.16
DDX41-208ENST00000507955 GPR65Q8IYL9 337 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 VN1R2Q8NFZ6 395 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 SLC29A3Q9BZD2 475 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 MUC13Q9H3R2 512 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 CERS4Q9HA82 394 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 CD320Q9NPF0 282 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 CDH7Q9ULB5 785 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 BTBD3Q9Y2F9 522 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 PRKAB1Q9Y478 270 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 GBAP04062 536 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 TFPTP0C1Z6 253 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 CYP2A6P11509 494 aaPredicted RBP14.06□□□□□ -0.16
DDX41-208ENST00000507955 AMD1P17707 334 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 PTPN6P29350 595 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 DGKGP49619 791 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 CLDN8P56748 225 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 NUP107P57740 925 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 CHRNB3Q05901 458 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 DOC2AQ14183 400 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 NEDD8Q15843 81 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 SPATS1Q496A3 300 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 SYTL3Q4VX76 610 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 ZNF805Q5CZA5 627 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 PLEKHS1Q5SXH7 462 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 NOXRED1Q6NXP6 359 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 TMEM179BQ7Z7N9 219 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 ZBTB46Q86UZ6 589 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 BTN2A2Q8WVV5 523 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 SGCDQ92629 289 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 TANKQ92844 425 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 MUS81Q96NY9 551 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 DOK1Q99704 481 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 BDH2Q9BUT1 245 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 TDRKHQ9Y2W6 561 aaKnown RBP14.06□□□□□ -0.16
DDX41-208ENST00000507955 MRPS23Q9Y3D9 190 aaKnown RBP14.06□□□□□ -0.16
DDX41-208ENST00000507955 PCDHGA11Q9Y5H2 935 aa14.06□□□□□ -0.16
DDX41-208ENST00000507955 MYO15AQ9UKN7 3530 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 GOLGA4Q13439 2230 aaKnown RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 VCANP13611 3396 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 TRBV5-3A0A0A0MS03 114 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 CFAP99D6REC4 459 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 ZNF701M0R085 212 aaPredicted RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 RAP2AP10114 183 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 FCGR1AP12314 374 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 ZNF30P17039 623 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 DCKP27707 260 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 SHMT2P34897 504 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 CASP9P55211 416 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 FAM98BQ52LJ0 330 aaKnown RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 DOK6Q6PKX4 331 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 AGTRAPQ6RW13 159 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 TECPR1Q7Z6L1 1165 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 CLECL1Q8IZS7 167 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 C2orf73Q8N5S3 287 aaPredicted RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 L3MBTL4Q8NA19 623 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 GPR156Q8NFN8 814 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 SNRNP27Q8WVK2 155 aaKnown RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 GLYATL1Q969I3 302 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 TMEM159Q96B96 161 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 FAF1Q9UNN5 650 aaPredicted RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 SH2B3Q9UQQ2 575 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 TCF20Q9UGU0 1960 aaKnown RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 TULP3O75386 442 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 GMNNO75496 209 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 SLCO2B1O94956 709 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 SERPINA1P01009 418 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 CST1P01037 141 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 CISD3P0C7P0 127 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 C7P10643 843 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 MAP4P27816 1152 aaKnown RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 HNMTP50135 292 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 PON2Q15165 354 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 ZNF284Q2VY69 593 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms