RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 KLHL41O60662 606 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 GH2P01242 217 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 CYC1P08574 325 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 FAM86B2P0C5J1 330 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 SFTPCP11686 197 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 NCF1P14598 390 aaPredicted RBP4.38□□□□□ -1.71
LINC01088-203ENST00000507476 MYL6BP14649 208 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 AREGP15514 252 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 GNAZP19086 355 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 CHRNA3P32297 505 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 WNT5AP41221 380 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 ACTR1AP61163 376 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 PITX1P78337 314 aaPredicted RBP4.38□□□□□ -1.71
LINC01088-203ENST00000507476 SREBF2Q12772 1141 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 RIPK1Q13546 671 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 NAE1Q13564 534 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 SNX1Q13596 522 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 GAMTQ14353 236 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 TRADDQ15628 312 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 UGCGQ16739 394 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 KCNT1Q5JUK3 1230 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.38□□□□□ -1.71
LINC01088-203ENST00000507476 RNASEH2BQ5TBB1 312 aaKnown RBP4.38□□□□□ -1.71
LINC01088-203ENST00000507476 IRAK1BP1Q5VVH5 260 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 RAET1GQ6H3X3 334 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 SLC25A24Q6NUK1 477 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 ANKRD54Q6NXT1 300 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 ARHGAP11AQ6P4F7 1023 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 INTS8Q75QN2 995 aaKnown RBP4.38□□□□□ -1.71
LINC01088-203ENST00000507476 CCNYQ8ND76 341 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 BRSK1Q8TDC3 778 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 HEXDCQ8WVB3 486 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 AP2M1Q96CW1 435 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 CNDP1Q96KN2 507 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 ZNF560Q96MR9 790 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 MS4A10Q96PG2 267 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 KLHL5Q96PQ7 755 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 F2RL3Q96RI0 385 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 LITAFQ99732 161 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 MXRA8Q9BRK3 442 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 PCGF1Q9BSM1 259 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 TEX13AQ9BXU3 409 aaPredicted RBP4.38□□□□□ -1.71
LINC01088-203ENST00000507476 OSBPL8Q9BZF1 889 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 ZNF350Q9GZX5 532 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 RAB17Q9H0T7 212 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 FN3KQ9H479 309 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 PLEKHA4Q9H4M7 779 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 PCDH9Q9HC56 1237 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 GPN1Q9HCN4 374 aaPredicted RBP4.38□□□□□ -1.71
LINC01088-203ENST00000507476 DDX4Q9NQI0 724 aaKnown RBP4.38□□□□□ -1.71
LINC01088-203ENST00000507476 CNGB3Q9NQW8 809 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 TMEM30AQ9NV96 361 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 RBM28Q9NW13 759 aaKnown RBP4.38□□□□□ -1.71
LINC01088-203ENST00000507476 LARSQ9P2J5 1176 aaKnown RBP4.38□□□□□ -1.71
LINC01088-203ENST00000507476 ANKMY1Q9P2S6 941 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 DNAJB4Q9UDY4 337 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 IGKV3D-15A0A087WSY6 115 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 CASQ2O14958 399 aaPredicted RBP4.37□□□□□ -1.71
LINC01088-203ENST00000507476 TEX28O15482 410 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 MED24O75448 989 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 SCGB2A1O75556 95 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 PRDM1O75626 825 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 RAD51DO75771 328 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 LETM1O95202 739 aaPredicted RBP4.37□□□□□ -1.71
LINC01088-203ENST00000507476 TGFAP01135 160 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 HSPA5P11021 654 aaKnown RBP4.37□□□□□ -1.71
LINC01088-203ENST00000507476 ITGA2P17301 1181 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 CCNCP24863 283 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 TMOD1P28289 359 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 CCND3P30281 292 aaPredicted RBP4.37□□□□□ -1.71
LINC01088-203ENST00000507476 GBX2P52951 348 aaPredicted RBP4.37□□□□□ -1.71
LINC01088-203ENST00000507476 ARFIP1P53367 373 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 PMP22Q01453 160 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 DPYSQ14117 519 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 NEDD9Q14511 834 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 KARSQ15046 597 aaKnown RBP4.37□□□□□ -1.71
LINC01088-203ENST00000507476 SGCBQ16585 318 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 TPD52L1Q16890 204 aaPredicted RBP4.37□□□□□ -1.71
LINC01088-203ENST00000507476 PNLIPRP3Q17RR3 467 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 VWC2Q2TAL6 325 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 IQCCQ4KMZ1 466 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 AARDQ4LEZ3 155 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 FAM98BQ52LJ0 330 aaKnown RBP4.37□□□□□ -1.71
LINC01088-203ENST00000507476 HSP90AB3PQ58FF7 597 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 RIPPLY2Q5TAB7 128 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 TMEM198Q66K66 360 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 ARHGAP17Q68EM7 881 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 ENPP7Q6UWV6 458 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 RUFY3Q7L099 469 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 TLK2Q86UE8 772 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 CCDC190Q86UF4 302 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 NOXA1Q86UR1 476 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.37□□□□□ -1.712e-7■■■■■ 278.5
LINC01088-203ENST00000507476 MAML2Q8IZL2 1156 aaPredicted RBP4.37□□□□□ -1.71
LINC01088-203ENST00000507476 METTL27Q8N6F8 245 aaPredicted RBP4.37□□□□□ -1.71
LINC01088-203ENST00000507476 HUS1BQ8NHY5 278 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 EXOC6Q8TAG9 804 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 ATL1Q8WXF7 558 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 FBXL8Q96CD0 374 aa4.37□□□□□ -1.71
LINC01088-203ENST00000507476 STAMBPL1Q96FJ0 436 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms