RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ZNF749O43361 778 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 ACSL3O95573 720 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 RHOXF2BP0C7M4 288 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 EZRP15311 586 aaKnown RBP16.02■□□□□ 0.16
SNCA-209ENST00000506244 DLSTP36957 453 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 RAB10P61026 200 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 ZKSCAN8Q15776 578 aaPredicted RBP16.02■□□□□ 0.16
SNCA-209ENST00000506244 PHKG1Q16816 387 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 YOD1Q5VVQ6 348 aaPredicted RBP16.02■□□□□ 0.16
SNCA-209ENST00000506244 FCRL6Q6DN72 434 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 CAPN13Q6MZZ7 669 aaPredicted RBP16.02■□□□□ 0.16
SNCA-209ENST00000506244 AGTRAPQ6RW13 159 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 RNF44Q7L0R7 432 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 TAOK1Q7L7X3 1001 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 MCATQ8IVS2 390 aaKnown RBP16.02■□□□□ 0.16
SNCA-209ENST00000506244 CEP97Q8IW35 865 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 PPFIBP2Q8ND30 876 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 PROKR1Q8TCW9 393 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 MR1Q95460 341 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 MED8Q96G25 268 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 ZFYVE21Q9BQ24 234 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 SELENOSQ9BQE4 189 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 RHOXF2Q9BQY4 288 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 DPH7Q9BTV6 452 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 NDC1Q9BTX1 674 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 FUT8Q9BYC5 575 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 TXLNGQ9NUQ3 528 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 CTNNAL1Q9UBT7 734 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 NFU1Q9UMS0 254 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 KLHL20Q9Y2M5 609 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 IKBKGQ9Y6K9 419 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 NPEPPSL1A6NEC2 478 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 C9J4A7 227 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 MEN1O00255 615 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 SRPX2O60687 465 aaPredicted RBP16.01■□□□□ 0.15
SNCA-209ENST00000506244 AGXTP21549 392 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 CRABP2P29373 138 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 PGGT1BP53609 377 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 ARSFP54793 590 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 ATP6V0D1P61421 351 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 CDKL1Q00532 357 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 GPS2Q13227 327 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 SRSF6Q13247 344 aaKnown RBP16.01■□□□□ 0.15
SNCA-209ENST00000506244 DNASE1L3Q13609 305 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 EFTUD2Q15029 972 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNCA-209ENST00000506244 RHBDD2Q6NTF9 364 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 SBSNQ6UWP8 590 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 TMEM207Q6UWW9 146 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 MBOAT1Q6ZNC8 495 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 RAPH1Q70E73 1250 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 ADCK2Q7Z695 626 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 SPNS2Q8IVW8 549 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 LRRC56Q8IYG6 542 aaPredicted RBP16.01■□□□□ 0.15
SNCA-209ENST00000506244 DSELQ8IZU8 1212 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 TTC29Q8NA56 475 aaPredicted RBP16.01■□□□□ 0.15
SNCA-209ENST00000506244 STARD8Q92502 1023 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 FBXL8Q96CD0 374 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 PLCD4Q9BRC7 762 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 HAUS8Q9BT25 410 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 GPR87Q9BY21 358 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 CAB39LQ9H9S4 337 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 SLC6A20Q9NP91 592 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 ABCF3Q9NUQ8 709 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 SNX7Q9UNH6 387 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 OARD1Q9Y530 152 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 PCDHGA6Q9Y5G7 932 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 FAM208BQ5VWN6 2430 aa16.01■□□□□ 0.15
SNCA-209ENST00000506244 A0A087WUV0 522 aaPredicted RBP16■□□□□ 0.15
SNCA-209ENST00000506244 H3BMH7 237 aa16■□□□□ 0.15
SNCA-209ENST00000506244 PHGDHO43175 533 aaKnown RBP16■□□□□ 0.15
SNCA-209ENST00000506244 ZNF500O60304 480 aaPredicted RBP16■□□□□ 0.15
SNCA-209ENST00000506244 WISP3O95389 354 aaPredicted RBP16■□□□□ 0.15
SNCA-209ENST00000506244 INHBAP08476 426 aa16■□□□□ 0.15
SNCA-209ENST00000506244 ANXA5P08758 320 aa16■□□□□ 0.15
SNCA-209ENST00000506244 TCN2P20062 427 aa16■□□□□ 0.15
SNCA-209ENST00000506244 RORAP35398 523 aa16■□□□□ 0.15
SNCA-209ENST00000506244 HNMTP50135 292 aa16■□□□□ 0.15
SNCA-209ENST00000506244 RPS15P62841 145 aaKnown RBP16■□□□□ 0.15
SNCA-209ENST00000506244 RELAQ04206 551 aa16■□□□□ 0.15
SNCA-209ENST00000506244 NAE1Q13564 534 aa16■□□□□ 0.15
SNCA-209ENST00000506244 GRM7Q14831 915 aa16■□□□□ 0.15
SNCA-209ENST00000506244 UAP1Q16222 522 aaPredicted RBP16■□□□□ 0.15
SNCA-209ENST00000506244 PPP1R3AQ16821 1122 aa16■□□□□ 0.15
SNCA-209ENST00000506244 CRTC2Q53ET0 693 aaPredicted RBP16■□□□□ 0.15
SNCA-209ENST00000506244 ZNF517Q6ZMY9 492 aaPredicted RBP16■□□□□ 0.15
SNCA-209ENST00000506244 TBC1D1Q86TI0 1168 aaPredicted RBP16■□□□□ 0.15
SNCA-209ENST00000506244 C17orf64Q86WR6 236 aa16■□□□□ 0.15
SNCA-209ENST00000506244 ZNF655Q8N720 491 aaPredicted RBP16■□□□□ 0.15
SNCA-209ENST00000506244 EIF1ADQ8N9N8 165 aaKnown RBP16■□□□□ 0.15
SNCA-209ENST00000506244 CT55Q8WUE5 264 aa16■□□□□ 0.15
SNCA-209ENST00000506244 RNF31Q96EP0 1072 aa16■□□□□ 0.15
SNCA-209ENST00000506244 UBL7Q96S82 380 aaPredicted RBP16■□□□□ 0.15
SNCA-209ENST00000506244 SGPP1Q9BX95 441 aa16■□□□□ 0.15
SNCA-209ENST00000506244 ENAMQ9NRM1 1142 aa16■□□□□ 0.15
SNCA-209ENST00000506244 PCMTD2Q9NV79 361 aa16■□□□□ 0.15
SNCA-209ENST00000506244 CFAP47Q6ZTR5 3102 aa16■□□□□ 0.15
SNCA-209ENST00000506244 ERVH48-1M5A8F1 160 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 CDC7O00311 574 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 CTSVO60911 334 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 FAM155BO75949 473 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms