RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PVRP15151 417 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 KRT15P19012 456 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 PSMB5P28074 263 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 CMPK1P30085 196 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 GGT5P36269 586 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 GLRBP48167 497 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 ARL4DP49703 201 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 TBPL1P62380 186 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 GABREP78334 506 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 ABATP80404 500 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 FOXK2Q01167 660 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 PRDX1Q06830 199 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 ZNF844Q08AG5 666 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 NAA25Q14CX7 972 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 TECRLQ5HYJ1 363 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 TMTC4Q5T4D3 741 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 PRAMEF13Q5VWM6 474 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 KIAA1614Q5VZ46 1190 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 ICE2Q659A1 982 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 CAPN13Q6MZZ7 669 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 LCTLQ6UWM7 567 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 CROCCP2Q86T23 111 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 TRIM73Q86UV7 250 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 KLHDC8AQ8IYD2 350 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 LSMEM2Q8N112 164 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 C19orf47Q8N9M1 422 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 NXPE2Q96DL1 559 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 TCTN2Q96GX1 697 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 TSNARE1Q96NA8 513 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 EGFL8Q99944 293 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 PRR14Q9BWN1 585 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 B3GNT4Q9C0J1 378 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 PDE7BQ9NP56 450 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 FBXO8Q9NRD0 319 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 PCMTD2Q9NV79 361 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 ZNF358Q9NW07 568 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 OCIAD1Q9NX40 245 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 NUDT4Q9NZJ9 180 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 CD274Q9NZQ7 290 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 PTBP2Q9UKA9 531 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 PMS2P1A4D2B8 440 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 GOLGA8RI6L899 631 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 UBXN8O00124 270 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 MAP2K7O14733 419 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 TAPBPO15533 448 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 KLK8O60259 260 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 IPO13O94829 963 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 S100BP04271 92 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 MTHFD2P13995 350 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 HGFP14210 728 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 FOLR1P15328 257 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 NPPBP16860 134 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 ITIH1P19827 911 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 MAGP20916 626 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 ETV5P41161 510 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 GRIA3P42263 894 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 RAB15P59190 212 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 ACY1Q03154 408 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 SLC18A2Q05940 514 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 TSTA3Q13630 321 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 IL11RAQ14626 422 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 ZIC1Q15915 447 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 PTCHD3Q3KNS1 767 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 THEMIS2Q5TEJ8 643 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 CYB5D1Q6P9G0 228 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 FIGLAQ6QHK4 219 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 LRIG3Q6UXM1 1119 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 BPHLQ86WA6 291 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 FAM129CQ86XR2 697 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 FAM20CQ8IXL6 584 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 GATA6Q92908 595 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 PYCR2Q96C36 320 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 MED8Q96G25 268 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 SLC46A1Q96NT5 459 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 ZIM3Q96PE6 472 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 TAAR9Q96RI9 348 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 MIPEPQ99797 713 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 MRPL57Q9BQC6 102 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 HAUS8Q9BT25 410 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 ACAT2Q9BWD1 397 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 CNOT10Q9H9A5 744 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 MRPS30Q9NP92 439 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 SOHLH2Q9NX45 425 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 SLC39A1Q9NY26 324 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 ANKMY1Q9P2S6 941 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 PISDQ9UG56 409 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 TAC3Q9UHF0 121 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 DCDC2Q9UHG0 476 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 TMCO1Q9UM00 188 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 PCDHGA3Q9Y5H0 932 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 URB1O60287 2271 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 CEP295Q9C0D2 2601 aa11.45□□□□□ -0.58
PDLIM5-208ENST00000504489 NCF1BA6NI72 391 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-208ENST00000504489 NCF1CA8MVU1 366 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-208ENST00000504489 CDRT15L2A8MXV6 281 aa11.44□□□□□ -0.58
PDLIM5-208ENST00000504489 FOXO6A8MYZ6 492 aa11.44□□□□□ -0.58
PDLIM5-208ENST00000504489 SUPT3HB4E1H0 165 aa11.44□□□□□ -0.58
PDLIM5-208ENST00000504489 AGRPO00253 132 aa11.44□□□□□ -0.58
PDLIM5-208ENST00000504489 PRAMEF10O60809 474 aa11.44□□□□□ -0.58
PDLIM5-208ENST00000504489 SUPT3HO75486 399 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms