RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TMEM173Q86WV6 379 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 TMPRSS6Q8IU80 811 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 C4orf19Q8IY42 314 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF276Q8N554 614 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 PNPLA1Q8N8W4 532 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 STEAP2Q8NFT2 490 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 OR8J1Q8NGP2 316 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 SOCS4Q8WXH5 440 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 AKAP1Q92667 903 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 SYN2Q92777 582 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 CELF1Q92879 486 aaKnown RBP4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 LENG9Q96B70 501 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 MUS81Q96NY9 551 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 NUDCD1Q96RS6 583 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 DDOQ99489 341 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 RAD9AQ99638 391 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 TMEM47Q9BQJ4 181 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 JPH2Q9BR39 696 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF559Q9BR84 538 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 CINPQ9BW66 212 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 TEX101Q9BY14 249 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 PIGMQ9H3S5 423 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 CPNE5Q9HCH3 593 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 CHMP1AQ9HD42 196 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 BPIFA1Q9NP55 256 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 RAB9BQ9NP90 201 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 CNOT2Q9NZN8 540 aaKnown RBP4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 TBC1D7Q9P0N9 293 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 CARD8Q9Y2G2 431 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 TMEM184BQ9Y519 407 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 CLIC4Q9Y696 253 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 SH3TC1Q8TE82 1336 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 CACNA1SQ13698 1873 aa4.18□□□□□ -1.74
HMGB1P21-201ENST00000502313 CACNA1FO60840 1977 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 CPED1A4D0V7 1026 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 GOLGA8OA6NCC3 632 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 FAM90A10PA6NDY2 464 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF716A6NP11 495 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 HNRNPCL2B2RXH8 293 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 KBTBD13C9JR72 458 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 GOLGA8NF8WBI6 632 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 H0Y8G0 127 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 H0YGN5 161 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 K7EQM0 130 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 PTGESO14684 152 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 RNF113AO15541 343 aaKnown RBP4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 SUV39H1O43463 412 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ATP9AO75110 1047 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 CNTN5O94779 1100 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 SERPINA3P01011 423 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 CXCL10P02778 98 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 FESP07332 822 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ADH4P08319 380 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 RHOXF2BP0C7M4 288 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 IQCF3P0C7M6 154 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 RFPL3SP0C7P2 107 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 PLA2G4BP0C869 781 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF735P0CB33 412 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 VPREB1P12018 145 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ATP6V1C1P21283 382 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 CALB2P22676 271 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 NMBRP28336 390 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ALDH1B1P30837 517 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 CLCN5P51795 746 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF75DP51815 510 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 SPAG1Q07617 926 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 PPP1R8Q12972 351 aaKnown RBP4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 GCKRQ14397 625 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 LARS2Q15031 903 aaKnown RBP4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 CYP1B1Q16678 543 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 TDRD12Q587J7 1177 aaKnown RBP4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 SGO1Q5FBB7 561 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 PLAC9Q5JTB6 97 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 TCTE1Q5JU00 501 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 EPHA10Q5JZY3 1008 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 PRAMEF20Q5VT98 475 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 METTL11BQ5VVY1 283 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 PRAMEF7Q5VXH5 474 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 B3GNTL1Q67FW5 361 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF585AQ6P3V2 769 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 PAPD4Q6PIY7 484 aaKnown RBP4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 METAP1DQ6UB28 335 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 LRRC70Q7Z2Q7 622 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 BNIPLQ7Z465 357 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 IGFN1Q86VF2 1251 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZDHHC21Q8IVQ6 265 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 LEMD2Q8NC56 503 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ADPRHL1Q8NDY3 354 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 TRIM58Q8NG06 486 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 OR56B1Q8NGI3 324 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 OR10T2Q8NGX3 314 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 HUS1BQ8NHY5 278 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 WDR20Q8TBZ3 569 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 Q8TCH9 128 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 MIPOL1Q8TD10 442 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 GPT2Q8TD30 523 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 TRPC4APQ8TEL6 797 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms