RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 C16orf72Q14CZ0 275 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 SETDB1Q15047 1291 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 AGBL2Q5U5Z8 902 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 LCTLQ6UWM7 567 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 PRSS42Q7Z5A4 293 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 ADCK2Q7Z695 626 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 RAB44Q7Z6P3 723 aaPredicted RBP11.46□□□□□ -0.57
CUX1-210ENST00000497815 TMPRSS12Q86WS5 348 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 FAM129CQ86XR2 697 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 DCBLD1Q8N8Z6 715 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 TRAPPC9Q96Q05 1148 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 DPH7Q9BTV6 452 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 PITPNM3Q9BZ71 974 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 CD244Q9BZW8 370 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 STRADBQ9C0K7 418 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 SLC6A20Q9NP91 592 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 ACSS2Q9NR19 701 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 C1GALT1Q9NS00 363 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 CUEDC1Q9NWM3 386 aaPredicted RBP11.46□□□□□ -0.57
CUX1-210ENST00000497815 PDP2Q9P2J9 529 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 OPTCQ9UBM4 332 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 TMCO1Q9UM00 188 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 PLLPQ9Y342 182 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 DYRK1BQ9Y463 629 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 ANGPTL3Q9Y5C1 460 aa11.46□□□□□ -0.57
CUX1-210ENST00000497815 CFAP54Q96N23 3096 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 G3V2L1 256 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 H7BY64 318 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 TOX3O15405 576 aaPredicted RBP11.45□□□□□ -0.58
CUX1-210ENST00000497815 KLK8O60259 260 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 NRP2O60462 931 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 ZBTB11O95625 1053 aaPredicted RBP11.45□□□□□ -0.58
CUX1-210ENST00000497815 ANKRD34CP0C6C1 535 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 CDH1P12830 882 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 HGFP14210 728 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 CPA3P15088 417 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 ATP5F1P24539 256 aaPredicted RBP11.45□□□□□ -0.58
CUX1-210ENST00000497815 CCKBRP32239 447 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 CSTF2P33240 577 aaKnown RBP eCLIP11.45□□□□□ -0.58
CUX1-210ENST00000497815 GGT5P36269 586 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 GRIA3P42263 894 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 MLLT3P42568 568 aaPredicted RBP11.45□□□□□ -0.58
CUX1-210ENST00000497815 HSD11B2P80365 405 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 CDC16Q13042 620 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 TRA2AQ13595 282 aaKnown RBP eCLIP11.45□□□□□ -0.58
CUX1-210ENST00000497815 ZIC1Q15915 447 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 PDK4Q16654 411 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 TTMPQ5BVD1 217 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 FIGLAQ6QHK4 219 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 ZYG11AQ6WRX3 759 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 TMPRSS7Q7RTY8 843 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 ARHGAP22Q7Z5H3 698 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 C17orf64Q86WR6 236 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 GALNT15Q8N3T1 639 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 TEX9Q8N6V9 391 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 ANKRD42Q8N9B4 389 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 C19orf47Q8N9M1 422 aaKnown RBP11.45□□□□□ -0.58
CUX1-210ENST00000497815 AGBL5Q8NDL9 886 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 UBTD2Q8WUN7 234 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 SLC5A11Q8WWX8 675 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 KLHL6Q8WZ60 621 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 NEIL2Q969S2 332 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 TLCD1Q96CP7 247 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 ATP6V1G3Q96LB4 118 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 PRAP1Q96NZ9 151 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 SH3GL2Q99962 352 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 SELENOSQ9BQE4 189 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 HAUS8Q9BT25 410 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 PCBD2Q9H0N5 130 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 ZNF768Q9H5H4 540 aaKnown RBP11.45□□□□□ -0.58
CUX1-210ENST00000497815 DNAJC11Q9NVH1 559 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 AKAP7Q9P0M2 348 aaPredicted RBP11.45□□□□□ -0.58
CUX1-210ENST00000497815 ACTL7BQ9Y614 415 aa11.45□□□□□ -0.58
CUX1-210ENST00000497815 RP1P56715 2156 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 IGKV1-8A0A0C4DH67 115 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 PMS2P1A4D2B8 440 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 EFCAB7A8K855 629 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 E7EQ34 232 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 TMX2-CTNND1H3BSU7 103 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 STX16-NPEPL1H3BU86 382 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 K7EPI3 171 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 DYNC1I1O14576 645 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 STX16O14662 325 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 MAP3K7O43318 606 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 EBLN1P0CF75 366 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 CCL4P13236 92 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 NELFEP18615 380 aaKnown RBP11.44□□□□□ -0.58
CUX1-210ENST00000497815 SPINK2P20155 84 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 HPDP32754 393 aaPredicted RBP11.44□□□□□ -0.58
CUX1-210ENST00000497815 SH3BP2P78314 561 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 ABATP80404 500 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 MEF2AQ02078 507 aaPredicted RBP11.44□□□□□ -0.58
CUX1-210ENST00000497815 FOXM1Q08050 763 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 MPP2Q14168 576 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 DEFB110Q30KQ9 67 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 C3orf38Q5JPI3 329 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 CATSPEREQ5SY80 951 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 FCRL6Q6DN72 434 aa11.44□□□□□ -0.58
CUX1-210ENST00000497815 RPS27LQ71UM5 84 aaKnown RBP11.44□□□□□ -0.58
CUX1-210ENST00000497815 RAB11FIP2Q7L804 512 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms