RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 SSX6Q7RTT6 188 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 FGD2Q7Z6J4 655 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 SLITRK4Q8IW52 837 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF565Q8N9K5 539 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 STYXQ8WUJ0 223 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 TWIST2Q8WVJ9 160 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 C1GALT1C1Q96EU7 318 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 C11orf24Q96F05 449 aaPredicted RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 LRRC46Q96FV0 321 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 AHCYL2Q96HN2 611 aaKnown RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 TMEM74Q96NL1 305 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 RPRD1AQ96P16 312 aaPredicted RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 MGLLQ99685 303 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 NKX6-2Q9C056 277 aaPredicted RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 OSGEPL1Q9H4B0 414 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 KLHL42Q9P2K6 505 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 AFF4Q9UHB7 1163 aaKnown RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF804BA4D1E1 1349 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 LINC00587B1AMM8 73 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 LCMT2O60294 686 aaKnown RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 SERPINA3P01011 423 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF14P17017 642 aaPredicted RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 SREBF1P36956 1147 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 TGFBR2P37173 567 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 PCP4P48539 62 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 SLC35A2P78381 396 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 VEPH1Q14D04 833 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 UGT8Q16880 541 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 PDSS1Q5T2R2 415 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 BCL2L15Q5TBC7 163 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 CCDC190Q86UF4 302 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 LIX1LQ8IVB5 337 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 SVBPQ8N300 66 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 SPATA6LQ8N4H0 392 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 MCPH1Q8NEM0 835 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ZMIZ2Q8NF64 920 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF566Q969W8 418 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 AKTIPQ9H8T0 292 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 CDHR5Q9HBB8 845 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 COX16Q9P0S2 106 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ASH2LQ9UBL3 628 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ERVW-1Q9UQF0 538 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 POLR3HQ9Y535 204 aaPredicted RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 MAGED1Q9Y5V3 778 aaPredicted RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 MON2Q7Z3U7 1717 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 CXCR6O00574 342 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 KCNQ2O43526 872 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 LINC00032P0C843 101 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 ITGAMP11215 1152 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 SYN1P17600 705 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 PSMB4P28070 264 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 EPHA5P54756 1037 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 ISL1P61371 349 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 HNRNPA0Q13151 305 aaKnown RBP7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 SLC6A19Q695T7 634 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 LRFN4Q6PJG9 635 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 BLOC1S3Q6QNY0 202 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 GDPGP1Q6ZNW5 385 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 SLC46A3Q7Z3Q1 461 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 CFAP206Q8IYR0 622 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 RDH10Q8IZV5 341 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 GATAD2BQ8WXI9 593 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 KCTD7Q96MP8 289 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 TTPALQ9BTX7 342 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 C14orf105Q9NVL8 296 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 ELF5Q9UKW6 265 aaPredicted RBP7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 STUB1Q9UNE7 303 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 DHX15O43143 795 aaKnown RBP7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 PMPCBO75439 489 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 KRT33AO76009 404 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 FHP07954 510 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 ITGB6P18564 788 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 TGFBR1P36897 503 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 BAG6P46379 1132 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 RGS6P49758 472 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 KCNQ1P51787 676 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 CDH8P55286 799 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 MTPNP58546 118 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 CNTN2Q02246 1040 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 SLC3A1Q07837 685 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 CHRNA6Q15825 494 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 MAPKAPK3Q16644 382 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 AAK1Q2M2I8 961 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 CTU2Q2VPK5 515 aaKnown RBP7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 Q5BKY6 102 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 SH3PXD2AQ5TCZ1 1133 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 GPR139Q6DWJ6 353 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 GPR153Q6NV75 609 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 KIAA1324Q6UXG2 1013 aaKnown RBP7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 ASB18Q6ZVZ8 466 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 VN1R5Q7Z5H4 357 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF454Q8N9F8 522 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 FRS2Q8WU20 508 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF670Q9BS34 389 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 GPN1Q9HCN4 374 aaPredicted RBP7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 GALNT9Q9HCQ5 603 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 PRDM5Q9NQX1 630 aaPredicted RBP7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 NKIRAS2Q9NYR9 191 aa7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 MYEF2Q9P2K5 600 aaKnown RBP7.98□□□□□ -1.13
CRNKL1-205ENST00000496549 ZFR2Q9UPR6 939 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms