RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 AFTPHQ6ULP2 937 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 TMEM207Q6UWW9 146 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 BNC2Q6ZN30 1099 aaPredicted RBP13.04□□□□□ -0.32
SAMM50-204ENST00000493161 SHISA5Q8N114 240 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 OR2L3Q8NG85 312 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 OR2A1Q8NGT9 310 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 OR4L1Q8NH43 312 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 ASZ1Q8WWH4 475 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 VPS50Q96JG6 964 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 CARD6Q9BX69 1037 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 TRIM8Q9BZR9 551 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.04□□□□□ -0.32
SAMM50-204ENST00000493161 RUBCNLQ9H714 662 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 MARCH4Q9P2E8 410 aaPredicted RBP13.04□□□□□ -0.32
SAMM50-204ENST00000493161 ITGB1BP2Q9UKP3 347 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 TTC7AQ9ULT0 858 aaPredicted RBP13.04□□□□□ -0.32
SAMM50-204ENST00000493161 POLQO75417 2590 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 IGHV1-45A0A0A0MS14 117 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 IDSB3KWA1 339 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 C1orf105O95561 183 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 RPN2P04844 631 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 SERPINA7P05543 415 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 APOA4P06727 396 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 ITGAMP11215 1152 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 FBLP22087 321 aaKnown RBP13.03□□□□□ -0.32
SAMM50-204ENST00000493161 CA7P43166 264 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 EMP2P54851 167 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 SNRPNP63162 240 aaKnown RBP13.03□□□□□ -0.32
SAMM50-204ENST00000493161 PMP22Q01453 160 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 ACVR1Q04771 509 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 FASTKQ14296 549 aaKnown RBP13.03□□□□□ -0.32
SAMM50-204ENST00000493161 CDSNQ15517 529 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 PRMT9Q6P2P2 845 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 CNSTQ6PJW8 725 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 RNF44Q7L0R7 432 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 GDF7Q7Z4P5 450 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 ZNF295-AS1Q8N0V1 137 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 DNAAF3Q8N9W5 541 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 OR6P1Q8NGX9 317 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 YIPF2Q9BWQ6 316 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 TSR3Q9UJK0 312 aaKnown RBP13.03□□□□□ -0.32
SAMM50-204ENST00000493161 MRPS2Q9Y399 296 aaKnown RBP13.03□□□□□ -0.32
SAMM50-204ENST00000493161 KLK4Q9Y5K2 254 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 F8P00451 2351 aa13.03□□□□□ -0.32
SAMM50-204ENST00000493161 TACC2O95359 2948 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 A0A0U1RQJ8 604 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 H0YGG7 62 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 C19orf84I3L1E1 186 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 PSMD3O43242 534 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 BMP10O95393 424 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 PTGER4P35408 488 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 ST13P50502 369 aaKnown RBP13.02□□□□□ -0.33
SAMM50-204ENST00000493161 KRTAP10-9P60411 292 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 ARF3P61204 181 aaPredicted RBP13.02□□□□□ -0.33
SAMM50-204ENST00000493161 ADORA2A-AS1P86434 159 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 CDH17Q12864 832 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 PCOLCEQ15113 449 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 SPA17Q15506 151 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 INAQ16352 499 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 SYT16Q17RD7 645 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 HKDC1Q2TB90 917 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 PRTGQ2VWP7 1150 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 P3H1Q32P28 736 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 FASTKD1Q53R41 847 aaKnown RBP13.02□□□□□ -0.33
SAMM50-204ENST00000493161 HIBCHQ6NVY1 386 aaPredicted RBP13.02□□□□□ -0.33
SAMM50-204ENST00000493161 PRUNE1Q86TP1 453 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 LINC00523Q86TU6 105 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 ZNF808Q8N4W9 903 aaPredicted RBP13.02□□□□□ -0.33
SAMM50-204ENST00000493161 AMER3Q8N944 861 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 LRRC57Q8N9N7 239 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 RNF214Q8ND24 703 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 SLC35B2Q8TB61 432 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 DPH7Q9BTV6 452 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 ACAT2Q9BWD1 397 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 LACRTQ9GZZ8 138 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 ETNK1Q9HBU6 452 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 ABI3Q9P2A4 366 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 TRPC4Q9UBN4 977 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 SUCOQ9UBS9 1254 aaKnown RBP13.02□□□□□ -0.33
SAMM50-204ENST00000493161 SEC14L3Q9UDX4 400 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 PACSIN2Q9UNF0 486 aaPredicted RBP13.02□□□□□ -0.33
SAMM50-204ENST00000493161 REXO2Q9Y3B8 237 aaKnown RBP13.02□□□□□ -0.33
SAMM50-204ENST00000493161 FAM169AQ9Y6X4 670 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 AKAP9Q99996 3911 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 CPAMD8Q8IZJ3 1885 aa13.02□□□□□ -0.33
SAMM50-204ENST00000493161 A0A1W2PQ72 361 aa13.01□□□□□ -0.33
SAMM50-204ENST00000493161 OR2A25A4D2G3 310 aa13.01□□□□□ -0.33
SAMM50-204ENST00000493161 GRID2IPA4D2P6 1211 aa13.01□□□□□ -0.33
SAMM50-204ENST00000493161 WFS1O76024 890 aa13.01□□□□□ -0.33
SAMM50-204ENST00000493161 RASAL1O95294 804 aa13.01□□□□□ -0.33
SAMM50-204ENST00000493161 COX6B1P14854 86 aa13.01□□□□□ -0.33
SAMM50-204ENST00000493161 NAP1L1P55209 391 aaKnown RBP13.01□□□□□ -0.33
SAMM50-204ENST00000493161 KLF1Q13351 362 aaPredicted RBP13.01□□□□□ -0.33
SAMM50-204ENST00000493161 MUM1Q2TAK8 710 aa13.01□□□□□ -0.33
SAMM50-204ENST00000493161 HMGCLL1Q8TB92 370 aa13.01□□□□□ -0.33
SAMM50-204ENST00000493161 SKA2Q8WVK7 121 aaPredicted RBP13.01□□□□□ -0.33
SAMM50-204ENST00000493161 ATG4AQ8WYN0 398 aa13.01□□□□□ -0.33
SAMM50-204ENST00000493161 RAD51AP1Q96B01 352 aa13.01□□□□□ -0.33
SAMM50-204ENST00000493161 CABS1Q96KC9 395 aa13.01□□□□□ -0.33
SAMM50-204ENST00000493161 TTC1Q99614 292 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms