RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 CCL24O00175 119 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 PCGF2P35227 344 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 TAF6P49848 677 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 CSNK2BP67870 215 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 AIMP1Q12904 312 aaKnown RBP4.43□□□□□ -1.7
CCDC39-206ENST00000489868 FIP1L1Q6UN15 594 aaKnown RBP4.43□□□□□ -1.7
CCDC39-206ENST00000489868 ZNF440Q8IYI8 595 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 TDRD5Q8NAT2 981 aaKnown RBP4.43□□□□□ -1.7
CCDC39-206ENST00000489868 GATAD1Q8WUU5 269 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 C4orf45Q96LM5 186 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 IWS1Q96ST2 819 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 FGFBP2Q9BYJ0 223 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 DNAJC4Q9NNZ3 241 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 PANK4Q9NVE7 773 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 NOTCH3Q9UM47 2321 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 C15orf61A6NNL5 157 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 DCXO43602 365 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 MAGEC1O60732 1142 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 DIAPH2O60879 1101 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 VTNP04004 478 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 GP1BBP13224 206 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 IRF2P14316 349 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 LHCGRP22888 699 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 MMP12P39900 470 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 ASCL1P50553 236 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 VAMP7P51809 220 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 UBASH3AP57075 661 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 E2F5Q15329 346 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 NPTX1Q15818 432 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 KYNUQ16719 465 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 GPR33Q49SQ1 333 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 TCTE1Q5JU00 501 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 G2E3Q7L622 706 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 LSMEM1Q8N8F7 131 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-206ENST00000489868 GPRC5AQ8NFJ5 357 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 LRRC3BQ96PB8 259 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 PKP2Q99959 881 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 TRIM15Q9C019 465 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 ST6GALNAC4Q9H4F1 302 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.42□□□□□ -1.7
CCDC39-206ENST00000489868 R4GN57 208 aa4.42□□□□□ -1.7
CCDC39-206ENST00000489868 SNURFLB1AK76 121 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 EPHB6O15197 1021 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 AP5Z1O43299 807 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 SLC2A2P11168 524 aaPredicted RBP4.41□□□□□ -1.7
CCDC39-206ENST00000489868 ACHEP22303 614 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 LIMK1P53667 647 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 RBPJQ06330 500 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 PHKG1Q16816 387 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 HLA-BQ31612 363 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 ARMC4Q5T2S8 1044 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 MFSD4BQ5TF39 518 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 LCN1P1Q5VSP4 162 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 RPUSD3Q6P087 351 aaKnown RBP4.41□□□□□ -1.7
CCDC39-206ENST00000489868 DET1Q7L5Y6 550 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 MAML2Q8IZL2 1156 aaPredicted RBP4.41□□□□□ -1.7
CCDC39-206ENST00000489868 PI4KAP1Q8N8J0 262 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 ARHGAP45Q92619 1136 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 EGFL8Q99944 293 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 PITPNM3Q9BZ71 974 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 TXLNGYQ9BZA5 131 aa4.41□□□□□ -1.7
CCDC39-206ENST00000489868 PPANQ9NQ55 473 aaKnown RBP4.41□□□□□ -1.7
CCDC39-206ENST00000489868 TRBV5-5A0A0J9YX44 114 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 SYNDIG1LA6NDD5 238 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 CLDN4O14493 209 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 ATP6AP2O75787 350 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 NXPH2O95156 264 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 BAG3O95817 575 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 GSRP00390 522 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 DNTTP04053 509 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 MYBL1P10243 752 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 KRT5P13647 590 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 EPCAMP16422 314 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 ALDH3A2P51648 485 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 KLC1Q07866 573 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 RASGEF1BQ0VAM2 473 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 MTF1Q14872 753 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 ZNF74Q16587 644 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 BSPRYQ5W0U4 402 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 LEKR1Q6ZMV7 388 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 ZNRF4Q8WWF5 429 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 SPSB1Q96BD6 273 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 NSMCE3Q96MG7 304 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 FAM218AQ96MZ4 157 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 KRT12Q99456 494 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 RBM4BQ9BQ04 359 aaKnown RBP4.4□□□□□ -1.71
CCDC39-206ENST00000489868 DGCR6LQ9BY27 220 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 ZMYND12Q9H0C1 365 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 NKIRAS2Q9NYR9 191 aa4.4□□□□□ -1.71
CCDC39-206ENST00000489868 O00370 1275 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 SAGP10523 405 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-206ENST00000489868 ALDH1B1P30837 517 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 GUCY2DQ02846 1103 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 ENPP2Q13822 863 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 NECTIN1Q15223 517 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 RASA2Q15283 850 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 SNAI3Q3KNW1 292 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 FASTKD1Q53R41 847 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms