RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ITGB6P18564 788 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 YWHAQP27348 245 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 DCTP40126 519 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 GLRBP48167 497 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 RARRES1P49788 294 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 GSK3AP49840 483 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 MEOX2P50222 304 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CLCNKAP51800 687 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CDH8P55286 799 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ERVFC1P60507 584 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 YBX1P67809 324 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF91Q05481 1191 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PCDH1Q08174 1060 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ADAM15Q13444 863 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 USP10Q14694 798 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 GRM3Q14832 879 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 RPS6KA2Q15349 733 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TBCEQ15813 527 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TATDN3Q17R31 274 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TIMM50Q3ZCQ8 353 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 RABL3Q5HYI8 236 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PDZK1Q5T2W1 519 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 METTL11BQ5VVY1 283 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 MLIPQ5VWP3 458 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 MZT2BQ6NZ67 158 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC39A4Q6P5W5 647 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 LRFN4Q6PJG9 635 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CES3Q6UWW8 571 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 MACC1Q6ZN28 852 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC26A9Q7LBE3 791 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 OVCH2Q7RTZ1 564 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 NECAB2Q7Z6G3 386 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 DPP9Q86TI2 863 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 XYLT1Q86Y38 959 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CYP4Z2PQ8N1L4 340 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CHCHD4Q8N4Q1 142 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CLRN3Q8NCR9 226 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 NLGN4YQ8NFZ3 816 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PCDH19Q8TAB3 1148 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 DCAF4Q8WV16 495 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ST8SIA2Q92186 375 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 MYLPFQ96A32 169 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TRMT61AQ96FX7 289 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ATXN7L3BQ96GX2 97 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 RADILQ96JH8 1075 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TBATAQ96M53 351 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 Q96MT0 163 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SPATA13Q96N96 652 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 RBM14Q96PK6 669 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 QKIQ96PU8 341 aaKnown RBP eCLIP4.64□□□□□ -1.674e-23■■■■□ 21.7
SNRNP40-206ENST00000489853 PEBP4Q96S96 227 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC9A7Q96T83 725 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 AGAP2Q99490 1192 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 KCNS3Q9BQ31 491 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM213AQ9BRX8 229 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TBCDQ9BTW9 1192 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 MLPHQ9BV36 600 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TEKT3Q9BXF9 490 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CEP41Q9BYV8 373 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 RHOJQ9H4E5 214 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ELOVL6Q9H5J4 265 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 POMKQ9H5K3 350 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 HEXA-AS1Q9H8Q6 139 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 AKTIPQ9H8T0 292 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 GORASP2Q9H8Y8 452 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SMURF1Q9HCE7 757 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SDR39U1Q9NRG7 319 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 KCNH7Q9NS40 1196 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 OLA1Q9NTK5 396 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SETD4Q9NVD3 440 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 EXD2Q9NVH0 621 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TMEM45AQ9NWC5 275 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 MAP3K20Q9NYL2 800 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TMOD3Q9NYL9 352 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 XPR1Q9UBH6 696 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 DPP7Q9UHL4 492 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TMEFF2Q9UIK5 374 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 KIF25Q9UIL4 384 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 LEF1Q9UJU2 399 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TINAGQ9UJW2 476 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ADAM30Q9UKF2 790 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PRR12Q9ULL5 1215 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PCDHB10Q9UN67 800 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 BAIAP2Q9UQB8 552 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 DTX4Q9Y2E6 619 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PRKAB1Q9Y478 270 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ALG5Q9Y673 324 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SESN1Q9Y6P5 492 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 V9GYH0 126 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 DDX60LQ5H9U9 1706 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PAPPAQ13219 1627 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 IRS2Q9Y4H2 1338 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 NUP98P52948 1817 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 A0A087X1B8 175 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 A0A0A6YYJ9 748 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ZCWPW2A0A1B0GU75 182 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 hCG_1807616A0A1W2PRN6 198 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SH3D21A4FU49 640 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 LRRC72A6NJI9 287 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms