RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 GDF3Q9NR23 364 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 FBXO34Q9NWN3 711 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 AURKAIP1Q9NWT8 199 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 JKAMPQ9P055 326 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 ZDHHC8Q9ULC8 765 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 TRPM6Q9BX84 2022 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 PTPRQQ9UMZ3 2332 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 A0A1B0GVT2 93 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 CCDC151A5D8V7 595 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 CDHR4A6H8M9 788 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 C2orf81A6NN90 581 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 C10orf142B7Z368 130 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 AP3B1O00203 1094 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 TLR4O00206 839 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 CACNB4O00305 520 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 PHGDHO43175 533 aaKnown RBP7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 DFNA5O60443 496 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 SLC43A1O75387 559 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 METTL18O95568 372 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 AP2A1O95782 977 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 AGTP01019 485 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 KRT14P02533 472 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 SLC4A1P02730 911 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 PCCBP05166 539 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 APRTP07741 180 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 ATXN1LP0C7T5 689 aaKnown RBP7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 THEGLP0DJG4 465 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 LHCGRP22888 699 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 RPL22P35268 128 aaKnown RBP7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 CHN2P52757 468 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 STC1P52823 247 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 THOP1P52888 689 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 YPEL5P62699 121 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 CXADRP78310 365 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 BASP1P80723 227 aaKnown RBP7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 SARNPP82979 210 aaKnown RBP7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 PDE1BQ01064 536 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 NHLH2Q02577 135 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 LAMB3Q13751 1172 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 IHHQ14623 411 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 SLC1A5Q15758 541 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 COLEC12Q5KU26 742 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 FAXCQ5TGI0 409 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 ZDHHC20Q5W0Z9 365 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 WDR93Q6P2C0 686 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 FBXO38Q6PIJ6 1188 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 CRTC1Q6UUV9 634 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 KYAT3Q6YP21 454 aaKnown RBP7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 PPP1R21Q6ZMI0 780 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 GLT6D1Q7Z4J2 308 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 TSPAN33Q86UF1 283 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 DNAAF3Q8N9W5 541 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 SPATA4Q8NEY3 305 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 BLOC1S5Q8TDH9 187 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 AP2M1Q96CW1 435 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 DTD2Q96FN9 168 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 COQ10AQ96MF6 247 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 KRTAP4-12Q9BQ66 201 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 PIH1D1Q9NWS0 290 aaKnown RBP7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 SMARCAL1Q9NZC9 954 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 RAB21Q9UL25 225 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 SHOC2Q9UQ13 582 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 PKP3Q9Y446 797 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 ZNF711Q9Y462 761 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 PTPN13Q12923 2485 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 MGAQ8IWI9 3026 aa7.92□□□□□ -1.14
TRAPPC12-221ENST00000489032 TEX15Q9BXT5 2789 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 A0A1W2PR77 199 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 DIRC3C9JPN6 131 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 STX7O15400 261 aaKnown RBP7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 YKT6O15498 198 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 PPFIA2O75334 1257 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 CLDN7O95471 211 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 HRGP04196 525 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 C1SP09871 688 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 RHOXF2BP0C7M4 288 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 PIRTP0C851 137 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 ETS1P14921 441 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 TSHRP16473 764 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 RHCEP18577 417 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 KELP23276 732 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 GPR1P46091 355 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 SPINT3P49223 89 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 ARRB1P49407 418 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 VPS41P49754 854 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 CLDN2P57739 230 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 CDK16Q00536 496 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 RHDQ02161 417 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 CDH17Q12864 832 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 GRIK2Q13002 908 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 GPS1Q13098 491 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 SEMA5AQ13591 1074 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 SPARCL1Q14515 664 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 IRF4Q15306 451 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 TRIP13Q15645 432 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 SMAD1Q15797 465 aaKnown RBP7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 KIF19Q2TAC6 998 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 WSCD2Q2TBF2 565 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 RAET1GQ6H3X3 334 aa7.91□□□□□ -1.14
TRAPPC12-221ENST00000489032 RANBP10Q6VN20 620 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms