RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 KCNMB4Q86W47 210 aa17.59■□□□□ 0.41
HDAC6-231ENST00000488905 OTUD6BQ8N6M0 293 aa17.59■□□□□ 0.41
HDAC6-231ENST00000488905 OR2A1Q8NGT9 310 aa17.59■□□□□ 0.41
HDAC6-231ENST00000488905 DNAJB14Q8TBM8 379 aa17.59■□□□□ 0.41
HDAC6-231ENST00000488905 MAGEC3Q8TD91 643 aa17.59■□□□□ 0.41
HDAC6-231ENST00000488905 GRHL3Q8TE85 626 aa17.59■□□□□ 0.41
HDAC6-231ENST00000488905 THOC3Q96J01 351 aaKnown RBP17.59■□□□□ 0.41
HDAC6-231ENST00000488905 MESP1Q9BRJ9 268 aa17.59■□□□□ 0.41
HDAC6-231ENST00000488905 ZNF304Q9HCX3 659 aa17.59■□□□□ 0.41
HDAC6-231ENST00000488905 MAP2K7O14733 419 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 HPP00738 406 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 ERVK-10P10266 1014 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 ACPPP15309 386 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 ARNTP27540 789 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 NMBRP28336 390 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 BASP1P80723 227 aaKnown RBP17.58■□□□□ 0.4
HDAC6-231ENST00000488905 OCA2Q04671 838 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 Q0VFX4 171 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 CDC16Q13042 620 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 NAA25Q14CX7 972 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 TLR1Q15399 786 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 SIX1Q15475 284 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-231ENST00000488905 STT3BQ8TCJ2 826 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 C10orf90Q96M02 699 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 BIRC8Q96P09 236 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 ZFYVE21Q9BQ24 234 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 BFARQ9NZS9 450 aa17.58■□□□□ 0.4
HDAC6-231ENST00000488905 ZNF282Q9UDV7 671 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-231ENST00000488905 ZC3H7BQ9UGR2 993 aaKnown RBP17.58■□□□□ 0.4
HDAC6-231ENST00000488905 TSR3Q9UJK0 312 aaKnown RBP17.58■□□□□ 0.4
HDAC6-231ENST00000488905 LOC105369274A0A096LPK9 316 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 LOC102723532A0A0G2JNH3 316 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 OR2A25A4D2G3 310 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 EIF2S1P05198 315 aaKnown RBP17.57■□□□□ 0.4
HDAC6-231ENST00000488905 ZGLP1P0C6A0 271 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 EDN3P14138 238 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 FBLP22087 321 aaKnown RBP17.57■□□□□ 0.4
HDAC6-231ENST00000488905 ATP5DP30049 168 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 MFAP5Q13361 173 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 FASTKQ14296 549 aaKnown RBP17.57■□□□□ 0.4
HDAC6-231ENST00000488905 GBX1Q14549 363 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 TYSND1Q2T9J0 566 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 MUM1Q2TAK8 710 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 ISLR2Q6UXK2 745 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 LINC00696Q6ZRV3 163 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 PRSS58Q8IYP2 241 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 OR4N4Q8N0Y3 316 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 FAR1Q8WVX9 515 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 LPGAT1Q92604 370 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 MIEF2Q96C03 454 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 TSGA10Q9BZW7 698 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 ZNF160Q9HCG1 818 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 C3orf18Q9UK00 162 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 SCN2AQ99250 2005 aa17.57■□□□□ 0.4
HDAC6-231ENST00000488905 MYO7BQ6PIF6 2116 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 IGLV3-12A0A075B6K2 115 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 AP3B1O00203 1094 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 NIPSNAP2O75323 286 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 MATN4O95460 622 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 ERGP11308 486 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 CMPK1P30085 196 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 YBX1P67809 324 aaKnown RBP17.56■□□□□ 0.4
HDAC6-231ENST00000488905 CCNG2Q16589 344 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 PRTGQ2VWP7 1150 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.56■□□□□ 0.4
HDAC6-231ENST00000488905 RNF187Q5TA31 235 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-231ENST00000488905 MRNIPQ6NTE8 343 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 C4orf22Q6V702 233 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 C8orf44Q96CB5 159 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 MFSD3Q96ES6 412 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 CABS1Q96KC9 395 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 DPH7Q9BTV6 452 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 ACAT2Q9BWD1 397 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 SYBUQ9NX95 663 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 STOX2Q9P2F5 926 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-231ENST00000488905 GUCA1BQ9UMX6 200 aa17.56■□□□□ 0.4
HDAC6-231ENST00000488905 H3BMM5 538 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 VPS26AO75436 327 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 KLHL18O94889 574 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 VAPBO95292 243 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 COX6A1P12074 109 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 MGAT1P26572 445 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 FMO4P31512 558 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 NPY2RP49146 381 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 VWA2Q5GFL6 755 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 DRICH1Q6PGQ1 229 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-231ENST00000488905 FAM180AQ6UWF9 173 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 CES3Q6UWW8 571 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 FAM136AQ96C01 138 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 SLX1AQ9BQ83 275 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 TRIM56Q9BRZ2 755 aaKnown RBP17.55■□□□□ 0.4
HDAC6-231ENST00000488905 KIFC1Q9BW19 673 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 OSGIN2Q9Y236 505 aa17.55■□□□□ 0.4
HDAC6-231ENST00000488905 NSG1A0A0A6YYJ2 146 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 ARHGEF33A8MVX0 844 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 GOLGA8KD6RF30 607 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 H0YGG7 62 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 GOLGA8TH3BQL2 631 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 PFDN6O15212 129 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 LRRTM2O43300 516 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms