RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 TGM7Q96PF1 710 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 CDC6Q99741 560 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 PAIP2Q9BPZ3 127 aaKnown RBP5.45□□□□□ -1.54
COPS3-208ENST00000486032 TMEM109Q9BVC6 243 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 ACAT2Q9BWD1 397 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 DERL2Q9GZP9 239 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 KLHL25Q9H0H3 589 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 STMN4Q9H169 189 aaPredicted RBP5.45□□□□□ -1.54
COPS3-208ENST00000486032 KIR3DX1Q9H7L2 352 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 RDH14Q9HBH5 336 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 PARVBQ9HBI1 364 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 TMBIM4Q9HC24 238 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 MLXIPLQ9NP71 852 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 ACSS2Q9NR19 701 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 ZNF446Q9NWS9 450 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 HRASLS2Q9NWW9 162 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 ARL15Q9NXU5 204 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 EURLQ9NYK6 297 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 WWOXQ9NZC7 414 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 XPR1Q9UBH6 696 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 DCDC2Q9UHG0 476 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 POLG2Q9UHN1 485 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 LGALS13Q9UHV8 139 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 LNPEPQ9UIQ6 1025 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 ICKQ9UPZ9 632 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 OARD1Q9Y530 152 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 U3KQA8 63 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 COL27A1Q8IZC6 1860 aaPredicted RBP5.45□□□□□ -1.54
COPS3-208ENST00000486032 BPTFQ12830 3046 aa5.45□□□□□ -1.54
COPS3-208ENST00000486032 AKAP13Q12802 2813 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 IGHV1OR21-1A0A087WYE8 117 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 PIPSLA2A3N6 862 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 WDR91A4D1P6 747 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 LRRC14BA6NHZ5 514 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 GFYI3L273 518 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 AGPSO00116 658 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 DYNC1I1O14576 645 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 SLC16A5O15375 505 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 ZW10O43264 779 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 B4GAT1O43505 415 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 DUX1O43812 170 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 CCNT2O60583 730 aaKnown RBP5.44□□□□□ -1.54
COPS3-208ENST00000486032 CBFA2T3O75081 653 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 SMIM24O75264 130 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 RFPL3O75679 317 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 RASSF9O75901 435 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 WDR47O94967 919 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 WISP3O95389 354 aaPredicted RBP5.44□□□□□ -1.54
COPS3-208ENST00000486032 SLC16A8O95907 504 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 RBP1P09455 135 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 FTH1P19P0C7X4 201 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 NEFHP12036 1026 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 COL6A2P12110 1019 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 TAC1P20366 129 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 CDH3P22223 829 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 ACP1P24666 158 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 PSMB5P28074 263 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 IMPA1P29218 277 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 PKLRP30613 574 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 HPDP32754 393 aaPredicted RBP5.44□□□□□ -1.54
COPS3-208ENST00000486032 SHMT2P34897 504 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 RPA3P35244 121 aaPredicted RBP5.44□□□□□ -1.54
COPS3-208ENST00000486032 ARL1P40616 181 aaPredicted RBP5.44□□□□□ -1.54
COPS3-208ENST00000486032 GDF5P43026 501 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 KCNC1P48547 511 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 HSPA7P48741 367 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 ACADVLP49748 655 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 SEPHS1P49903 392 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 RAB28P51157 221 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 LIMK1P53667 647 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 PNLIPRP1P54315 467 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 GFERP55789 205 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 PPP1CAP62136 330 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 SP140Q13342 867 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 NAE1Q13564 534 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 COL9A2Q14055 689 aaPredicted RBP5.44□□□□□ -1.54
COPS3-208ENST00000486032 SPIDRQ14159 915 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 GRB7Q14451 532 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 ACAP2Q15057 778 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 TGFBIQ15582 683 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 PFKFB4Q16877 469 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 TTMPQ5BVD1 217 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 TECRLQ5HYJ1 363 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 PHF19Q5T6S3 580 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 AGTRAPQ6RW13 159 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 SBSNQ6UWP8 590 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 ZNF438Q7Z4V0 828 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 ADCK2Q7Z695 626 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 SPRED1Q7Z699 444 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 PIP4P1Q86T03 277 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 ADAMTSL2Q86TH1 951 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 ISCA2Q86U28 154 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 TRIM73Q86UV7 250 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 C17orf82Q86X59 251 aaPredicted RBP5.44□□□□□ -1.54
COPS3-208ENST00000486032 RBM12BQ8IXT5 1001 aaKnown RBP5.44□□□□□ -1.54
COPS3-208ENST00000486032 FBXO39Q8N4B4 442 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 SNX31Q8N9S9 440 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 OR6C4Q8NGE1 309 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 TCP10LQ8TDR4 215 aa5.44□□□□□ -1.54
COPS3-208ENST00000486032 ACMSDQ8TDX5 336 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms