RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SCNM1Q9BWG6 230 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 CNOT10Q9H9A5 744 aaKnown RBP17.17■□□□□ 0.34
CPNE1-224ENST00000483359 TMBIM4Q9HC24 238 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 SLC6A20Q9NP91 592 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 PTBP2Q9UKA9 531 aaKnown RBP17.17■□□□□ 0.34
CPNE1-224ENST00000483359 GRID1Q9ULK0 1009 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 LOXL2Q9Y4K0 774 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 TOX3O15405 576 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-224ENST00000483359 SMIM24O75264 130 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 SIX3O95343 332 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-224ENST00000483359 ZBTB11O95625 1053 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-224ENST00000483359 ANKRD34CP0C6C1 535 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 ITIH1P19827 911 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 CCND1P24385 295 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 CMPK1P30085 196 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 ZIC1Q15915 447 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 DEFB110Q30KQ9 67 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 RAB11FIP2Q7L804 512 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 DPH7Q9BTV6 452 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 ZNF446Q9NWS9 450 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 OCIAD1Q9NX40 245 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 SENP1Q9P0U3 644 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 SATB2Q9UPW6 733 aa17.17■□□□□ 0.34
CPNE1-224ENST00000483359 IGKV1-8A0A0C4DH67 115 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 A0A1W2PNU3 283 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-224ENST00000483359 CCDC189A1A4V9 331 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 EFCAB7A8K855 629 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 STK16O75716 305 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 EBLN1P0CF75 366 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 CCL4P13236 92 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 GRIA3P42263 894 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 MLLT3P42568 568 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-224ENST00000483359 PRDX1Q06830 199 aaKnown RBP17.16■□□□□ 0.34
CPNE1-224ENST00000483359 SETDB1Q15047 1291 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 TNFAIP8L3Q5GJ75 292 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 AGBL5Q8NDL9 886 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 TCP10LQ8TDR4 215 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 RNF31Q96EP0 1072 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 CD244Q9BZW8 370 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 VIPAS39Q9H9C1 493 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 ACSS2Q9NR19 701 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 SLC17A7Q9P2U7 560 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 PCM1Q15154 2024 aa17.16■□□□□ 0.34
CPNE1-224ENST00000483359 A8MT66 165 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 TARM1B6A8C7 271 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 HGSO14964 777 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-224ENST00000483359 KLK8O60259 260 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 PLIN3O60664 434 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 PROCP04070 461 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 CDH1P12830 882 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 NPPBP16860 134 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 NELFEP18615 380 aaKnown RBP17.15■□□□□ 0.34
CPNE1-224ENST00000483359 ALDH18A1P54886 795 aaKnown RBP17.15■□□□□ 0.34
CPNE1-224ENST00000483359 HSD11B2P80365 405 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 FOXM1Q08050 763 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 CDKL4Q5MAI5 379 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 LCTLQ6UWM7 567 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 C17orf64Q86WR6 236 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 SNX31Q8N9S9 440 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 ARMC2Q8NEN0 867 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 KLHL6Q8WZ60 621 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 ARL8AQ96BM9 186 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 LIN37Q96GY3 246 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-224ENST00000483359 FAM111AQ96PZ2 611 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 STMN4Q9H169 189 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-224ENST00000483359 FAM60AQ9NP50 221 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 MKS1Q9NXB0 559 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 AKAP7Q9P0M2 348 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-224ENST00000483359 CCDC187A0A096LP49 1063 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 TMX2-CTNND1H3BSU7 103 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 H7BY64 318 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 IPO13O94829 963 aaKnown RBP17.15■□□□□ 0.34
CPNE1-224ENST00000483359 CCNDBP1O95273 360 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 TAC1P20366 129 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 EEF1DP29692 281 aaKnown RBP17.15■□□□□ 0.34
CPNE1-224ENST00000483359 GGT5P36269 586 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 COL9A2Q14055 689 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-224ENST00000483359 CCDC153Q494R4 210 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 FCRL6Q6DN72 434 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 TMPRSS11BQ86T26 416 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 NEIL2Q969S2 332 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 SLC41A2Q96JW4 573 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 PRAP1Q96NZ9 151 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 FCRL4Q96PJ5 515 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 PCBD2Q9H0N5 130 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 PDE7BQ9NP56 450 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 OPTCQ9UBM4 332 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 PISDQ9UG56 409 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 DYRK1BQ9Y463 629 aa17.15■□□□□ 0.34
CPNE1-224ENST00000483359 TYROBPO43914 113 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 DLX3O60479 287 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 ADRB1P08588 477 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 JMJD7P0C870 316 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 FOLR1P15328 257 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 MAPK10P53779 464 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 MAGOHP61326 146 aaKnown RBP17.14■□□□□ 0.33
CPNE1-224ENST00000483359 MEF2AQ02078 507 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-224ENST00000483359 GPR19Q15760 415 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 CATSPEREQ5SY80 951 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 FIGLAQ6QHK4 219 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms