RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 DLX3O60479 287 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 THRAP10827 490 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 CDH1P12830 882 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 ST6GAL1P15907 406 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 TSPAN8P19075 237 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 MAGP20916 626 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 CMPK1P30085 196 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 ARL1P40616 181 aaPredicted RBP12.75□□□□□ -0.37
HDAC1-208ENST00000482310 ARL4DP49703 201 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 HNMTP50135 292 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 ALDH18A1P54886 795 aaKnown RBP12.75□□□□□ -0.37
HDAC1-208ENST00000482310 INHBCP55103 352 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 MEF2AQ02078 507 aaPredicted RBP12.75□□□□□ -0.37
HDAC1-208ENST00000482310 KCNAB1Q14722 419 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 SETDB1Q15047 1291 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 DEFB110Q30KQ9 67 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 ICE2Q659A1 982 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 RAB44Q7Z6P3 723 aaPredicted RBP12.75□□□□□ -0.37
HDAC1-208ENST00000482310 LCA5Q86VQ0 697 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 FAM129CQ86XR2 697 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 TMEM151AQ8N4L1 468 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 CHCHD4Q8N4Q1 142 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 TEX9Q8N6V9 391 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 OR2L3Q8NG85 312 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 OR4D9Q8NGE8 314 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 OR2A1Q8NGT9 310 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 OR56A3Q8NH54 315 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 HMGCLL1Q8TB92 370 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 DEPDC7Q96QD5 511 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 OR4K3Q96R72 315 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 SH3GL2Q99962 352 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 CNOT10Q9H9A5 744 aaKnown RBP12.75□□□□□ -0.37
HDAC1-208ENST00000482310 PRM3Q9NNZ6 103 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 MKS1Q9NXB0 559 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 OPTCQ9UBM4 332 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 PTBP2Q9UKA9 531 aaKnown RBP12.75□□□□□ -0.37
HDAC1-208ENST00000482310 CLCA2Q9UQC9 943 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 ANGPTL3Q9Y5C1 460 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 ENTPD2Q9Y5L3 495 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 TMEM120BA0PK00 339 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 TARM1B6A8C7 271 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 G3V2L1 256 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 CLGNO14967 610 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 STK16O75716 305 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 C9P02748 559 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 HGFP14210 728 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 JUPP14923 745 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 CPA3P15088 417 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 ATP5F1P24539 256 aaPredicted RBP12.74□□□□□ -0.37
HDAC1-208ENST00000482310 GRIA3P42263 894 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 MLLT3P42568 568 aaPredicted RBP12.74□□□□□ -0.37
HDAC1-208ENST00000482310 SLC6A12P48065 614 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 PCLAFQ15004 111 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 RBBP7Q16576 425 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 ZYG11AQ6WRX3 759 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 TMPRSS11BQ86T26 416 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 C17orf64Q86WR6 236 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 C10orf107Q8IVU9 208 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 SLITRK4Q8IW52 837 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 CCNYL1Q8N7R7 359 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 WDR48Q8TAF3 677 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 SLC22A18Q96BI1 424 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 NSUN5Q96P11 429 aaKnown RBP12.74□□□□□ -0.37
HDAC1-208ENST00000482310 TMEM237Q96Q45 408 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 DPH7Q9BTV6 452 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 SGPP1Q9BX95 441 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 CD244Q9BZW8 370 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 DNAJC11Q9NVH1 559 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 SCN2AQ99250 2005 aa12.74□□□□□ -0.37
HDAC1-208ENST00000482310 FRYQ5TBA9 3013 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 PMS2P1A4D2B8 440 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 E7EQ34 232 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 H7BY64 318 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 HYAL3O43820 417 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-208ENST00000482310 PRICKLE3O43900 615 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-208ENST00000482310 CCNDBP1O95273 360 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 STATHP02808 62 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 EBLN1P0CF75 366 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 SPINK2P20155 84 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 CCND1P24385 295 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 SH3BP2P78314 561 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 CYP4F3Q08477 520 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 CDC16Q13042 620 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 TARDBPQ13148 414 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDAC1-208ENST00000482310 GTF2H2Q13888 395 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 MPP2Q14168 576 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 C16orf72Q14CZ0 275 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 PDK4Q16654 411 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 SLC5A12Q1EHB4 618 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 ISXQ2M1V0 245 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 C3orf38Q5JPI3 329 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 CATSPEREQ5SY80 951 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 CDCP2Q5VXM1 449 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 FAM219BQ5XKK7 198 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 GTF2H2CQ6P1K8 395 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 FIGLAQ6QHK4 219 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 LCTLQ6UWM7 567 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 PRSS42Q7Z5A4 293 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 GOLGA7Q7Z5G4 137 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 MYLK4Q86YV6 388 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms