RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 XKR6Q5GH73 641 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 SLC35D3Q5M8T2 416 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 SPATA21Q7Z572 469 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 NRARPQ7Z6K4 114 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 TIGD4Q8IY51 512 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 ZMYND12Q9H0C1 365 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 ZNF71Q9NQZ8 489 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-210ENST00000482158 FAM72CH0Y354 149 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 BLOC1S5-TXNDC5H3BN57 136 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 SNX3O60493 162 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 FCGR3BO75015 233 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 BAG3O95817 575 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 RPN1P04843 607 aaKnown RBP5.1□□□□□ -1.59
SF3B1-210ENST00000482158 FAM157CP0CG43 387 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 DARSP14868 501 aaKnown RBP5.1□□□□□ -1.59
SF3B1-210ENST00000482158 CASTP20810 708 aaKnown RBP5.1□□□□□ -1.59
SF3B1-210ENST00000482158 CSTF2P33240 577 aaKnown RBP eCLIP5.1□□□□□ -1.593e-11■■■□□ 17
SF3B1-210ENST00000482158 CDKN1AP38936 164 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 ILF2Q12905 390 aaKnown RBP5.1□□□□□ -1.59
SF3B1-210ENST00000482158 NONOQ15233 471 aaKnown RBP eCLIP5.1□□□□□ -1.59
SF3B1-210ENST00000482158 C20orf194Q5TEA3 1177 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 FAM72AQ5TYM5 149 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 TXNRD3NBQ6F5E7 133 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 OR4A47Q6IF82 309 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 FAM72DQ6L9T8 149 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 SH2D5Q6ZV89 423 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 FAM72BQ86X60 149 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 KLHDC8BQ8IXV7 354 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 NDUFAF2Q8N183 169 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 SIX6OS1Q8N1H7 587 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 OR2T11Q8NH01 316 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 EXOC4Q96A65 974 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 MAP3K3Q99759 626 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 TCF19Q9Y242 345 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 C2CD2Q9Y426 696 aa5.1□□□□□ -1.59
SF3B1-210ENST00000482158 DISP3Q9P2K9 1392 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 STK36Q9NRP7 1315 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 A0A1W2PPW3 197 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 PI4K2BG5E9Z4 385 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 O00370 1275 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 PCDH7O60245 1069 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 RPS6KA5O75582 802 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 MOCS3O95396 460 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 APOHP02749 345 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-210ENST00000482158 EDN1P05305 212 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 SPP1P10451 314 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 KRT83P78385 493 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 CDR2Q01850 454 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 SCN1BQ07699 218 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 RRS1Q15050 365 aaKnown RBP5.09□□□□□ -1.59
SF3B1-210ENST00000482158 GPR33Q49SQ1 333 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 LRRC73Q5JTD7 316 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 UGT3A1Q6NUS8 523 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 NOTUMQ6P988 496 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 C15orf39Q6ZRI6 1047 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 KIRREL3Q8IZU9 778 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 RYBPQ8N488 228 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-210ENST00000482158 KLHDC1Q8N7A1 406 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 TMEM190Q8WZ59 177 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 P2RX5Q93086 422 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 GIMAP5Q96F15 307 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 JAKMIP1Q96N16 626 aaKnown RBP5.09□□□□□ -1.59
SF3B1-210ENST00000482158 F2RL3Q96RI0 385 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 DESI2Q9BSY9 194 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 ATP13A3Q9H7F0 1226 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 RASAL2Q9UJF2 1139 aa5.09□□□□□ -1.59
SF3B1-210ENST00000482158 A0A0G2JLW4 131 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 MSGN1A6NI15 193 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 C2CD4DB7Z1M9 353 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 SELENOFO60613 162 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 SERPING1P05155 500 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 VIMP08670 466 aaKnown RBP5.08□□□□□ -1.6
SF3B1-210ENST00000482158 CFC1BP0CG36 223 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 CFC1P0CG37 223 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 GNB3P16520 340 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 ALDH1B1P30837 517 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 MAP2K2P36507 400 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 CDX1P47902 265 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-210ENST00000482158 HERV-K104P61576 105 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 GNB1P62873 340 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 CDO1Q16878 200 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 PDLIM3Q53GG5 364 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-210ENST00000482158 C9orf50Q5SZB4 431 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 FAM166AQ6J272 317 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 CYB5D1Q6P9G0 228 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 BTNL8Q6UX41 500 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 NAF1Q96HR8 494 aaKnown RBP5.08□□□□□ -1.6
SF3B1-210ENST00000482158 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 NDNQ99608 321 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 THAP2Q9H0W7 228 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 ACTL8Q9H568 366 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 PHPT1Q9NRX4 125 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-210ENST00000482158 TNNQ9UQP3 1299 aa5.08□□□□□ -1.6
SF3B1-210ENST00000482158 TRBV5-5A0A0J9YX44 114 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 SLC30A4O14863 429 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 TRMUO75648 421 aaKnown RBP5.07□□□□□ -1.6
SF3B1-210ENST00000482158 LUC7L3O95232 432 aaKnown RBP5.07□□□□□ -1.6
SF3B1-210ENST00000482158 TGDSO95455 350 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 SUPT20HL2P0C7V6 817 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms