RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 DECR1Q16698 335 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 ABHD15Q6UXT9 468 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 AQP12AQ8IXF9 295 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 ACDQ96AP0 544 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 VPS29Q9UBQ0 182 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 DOCK10Q96BY6 2186 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 MROH1Q8NDA8 1641 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 ZNF670-ZNF695F2Z2N8 137 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 ANXA3P12429 323 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 CDKL4Q5MAI5 379 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 ANKRD46Q86W74 232 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 YIPF7Q8N8F6 280 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 SNX27Q96L92 541 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 ZNF358Q9NW07 568 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 CYTH4Q9UIA0 394 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 TLR6Q9Y2C9 796 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 SH3D21A4FU49 640 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 RPS14P62263 151 aaKnown RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 S100A12P80511 92 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 HID1Q8IV36 788 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 KAZALD1Q96I82 304 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 NUP50Q9UKX7 468 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 GDI2P50395 445 aaKnown RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 HERV-K104P61576 105 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 ARSJQ5FYB0 599 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 MFSD2AQ8NA29 543 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 ZNF350Q9GZX5 532 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 RABL2AQ9UBK7 228 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 GTF2IRD1Q9UHL9 959 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 RABL2BQ9UNT1 228 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 CACNA1EQ15878 2313 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 ZNF806P0C7X5 589 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 TIGD6Q17RP2 521 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 PLEKHN1Q494U1 663 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 NMUR1Q9HB89 426 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 IGSF9Q9P2J2 1179 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 PRKAB1Q9Y478 270 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 SNX10Q9Y5X0 201 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 SMIM28A0A1B0GU29 152 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 SEC23BQ15437 767 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 EARS2Q5JPH6 523 aaKnown RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 VITQ6UXI7 678 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 CYP2U1Q7Z449 544 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 OR10G2Q8NGC3 310 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 COPS5Q92905 334 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 CD180Q99467 661 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 DPEP2Q9H4A9 486 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 WDR26Q9H7D7 661 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 ALKBH4Q9NXW9 302 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 C8BP07358 591 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 NPR2P20594 1047 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 HSD3B2P26439 372 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 UNQ6126/PRO20091Q6UXV3 157 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 FBXO15Q8NCQ5 510 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 OR2L2Q8NH16 312 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 TMEM209Q96SK2 561 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 C11orf84Q9BUA3 381 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 EIF3KQ9UBQ5 218 aaKnown RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 GSTT2P0CG29 244 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 SCNN1AP37088 669 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 RAB39AQ14964 217 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 NINJ1Q92982 152 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 EIF2B4Q9UI10 523 aaKnown RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 TESMINQ9Y4I5 508 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 CLCA3PQ9Y6N3 262 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 GNB5O14775 395 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 SOX30O94993 753 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 GP1BBP13224 206 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 HOXB9P17482 250 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 CSTF2P33240 577 aaKnown RBP eCLIP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 TAS2R43P59537 309 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 CRB2Q5IJ48 1285 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 TOMM5Q8N4H5 51 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 PHB2Q99623 299 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 PLCL2Q9UPR0 1127 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 M0QX08 132 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 CLEC3AO75596 197 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 DGKGP49619 791 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 PDGFRLQ15198 375 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 ASTE1Q2TB18 679 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 VARS2Q5ST30 1063 aaKnown RBP9.33□□□□□ -0.92
VEGFA-212ENST00000480614 TSTD1Q8NFU3 115 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 AKAP11Q9UKA4 1901 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 TMEM125Q96AQ2 219 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 PIWIL1Q96J94 861 aaKnown RBP9.32□□□□□ -0.92
VEGFA-212ENST00000480614 TBATAQ96M53 351 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 DPAGT1Q9H3H5 408 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 TNFRSF10DQ9UBN6 386 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 ARL5CA6NH57 179 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 K7EPI3 171 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 PEX12O00623 359 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 GALK1P51570 392 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 SGCBQ16585 318 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 TDP1Q9NUW8 608 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 FBXW11Q9UKB1 542 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 PRLP01236 227 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 ETS2P15036 469 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 GJA1P17302 382 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 DSG2Q14126 1118 aa9.32□□□□□ -0.92
VEGFA-212ENST00000480614 SIM2Q14190 667 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms