RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 MSL3P1P0C860 447 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 ERGP11308 486 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 ITGAXP20702 1163 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 CYP2A7P20853 494 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 ITGA1P56199 1179 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 SNRPNP63162 240 aaKnown RBP16.96■□□□□ 0.3
PTPN7-209ENST00000477554 ILF2Q12905 390 aaKnown RBP16.96■□□□□ 0.3
PTPN7-209ENST00000477554 ZNF460Q14592 562 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 SLC9A5Q14940 896 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 SF1Q15637 639 aaKnown RBP16.96■□□□□ 0.3
PTPN7-209ENST00000477554 CYP2A13Q16696 494 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 DEFB109BQ30KR1 87 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 FAM198BQ6UWH4 519 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 TMEM207Q6UWW9 146 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 KIAA0408Q6ZU52 694 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 CROCCP2Q86T23 111 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 SLC26A11Q86WA9 606 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 PPM1NQ8N819 430 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 ZSCAN1Q8NBB4 408 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 OR9A1PQ8NGU1 263 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 ASB11Q8WXH4 323 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 INPP5DQ92835 1189 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 KIAA1143Q96AT1 154 aaPredicted RBP16.96■□□□□ 0.3
PTPN7-209ENST00000477554 CLIP3Q96DZ5 547 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 TCTN2Q96GX1 697 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 ACTR5Q9H9F9 607 aaPredicted RBP16.96■□□□□ 0.3
PTPN7-209ENST00000477554 ABCF3Q9NUQ8 709 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 TXNDC16Q9P2K2 825 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 VPS9D1Q9Y2B5 631 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 PCDHB3Q9Y5E6 796 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 PCM1Q15154 2024 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 SEC16AO15027 2179 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 GFYI3L273 518 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 ATP8B1O43520 1251 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 TSPAN12O95859 305 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 SLC16A8O95907 504 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 C1QAP02745 245 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 SHBGP04278 402 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 CCNYL3P0C7X3 344 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 MSH2P43246 934 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 TSTA3Q13630 321 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-209ENST00000477554 ZXDCQ2QGD7 858 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-209ENST00000477554 FRMPD2BQ6IN97 320 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 FIGLAQ6QHK4 219 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 GALNT7Q86SF2 657 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 LRRC56Q8IYG6 542 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-209ENST00000477554 SYTL1Q8IYJ3 562 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 OR2L3Q8NG85 312 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 ZNF480Q8WV37 535 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 PKNOX2Q96KN3 472 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 ZIM3Q96PE6 472 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 CPNE1Q99829 537 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 CCDC68Q9H2F9 335 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-209ENST00000477554 SH2B3Q9UQQ2 575 aa16.95■□□□□ 0.3
PTPN7-209ENST00000477554 LOC105369274A0A096LPK9 316 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 LOC102723532A0A0G2JNH3 316 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 E7EQ34 232 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 POC1B-GALNT4F8VUJ3 575 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 CNOT3O75175 753 aaKnown RBP16.94■□□□□ 0.3
PTPN7-209ENST00000477554 OR2B3O76000 313 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 SYF2O95926 243 aaKnown RBP16.94■□□□□ 0.3
PTPN7-209ENST00000477554 INHBAP08476 426 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 GMPRP36959 345 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 GCGRP47871 477 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 PHKG1Q16816 387 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 HECTD2Q5U5R9 776 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 BPHLQ86WA6 291 aaPredicted RBP16.94■□□□□ 0.3
PTPN7-209ENST00000477554 MCATQ8IVS2 390 aaKnown RBP16.94■□□□□ 0.3
PTPN7-209ENST00000477554 OR4N4Q8N0Y3 316 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 GPATCH11Q8N954 259 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 HMGCLL1Q8TB92 370 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 SLC44A1Q8WWI5 657 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 FOPNLQ96NB1 174 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 PAFAH2Q99487 392 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 TMEM109Q9BVC6 243 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 ACBD3Q9H3P7 528 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 FANCEQ9HB96 536 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 EURLQ9NYK6 297 aa16.94■□□□□ 0.3
PTPN7-209ENST00000477554 HEATR5BQ9P2D3 2071 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 CDC14CA4D256 554 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 K7EM74 188 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 MAP2K7O14733 419 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 VPS26AO75436 327 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 ITGB2P05107 769 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 MPC1LP0DKB6 136 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 FDXRP22570 491 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 IMPA1P29218 277 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 GP5P40197 560 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 CCNFP41002 786 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 EFTUD2Q15029 972 aaKnown RBP eCLIP16.93■□□□□ 0.3
PTPN7-209ENST00000477554 COLEC12Q5KU26 742 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 GRTP1Q5TC63 336 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 TTC23LQ6PF05 361 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 NEK10Q6ZWH5 1172 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 UBE2R2Q712K3 238 aaPredicted RBP16.93■□□□□ 0.3
PTPN7-209ENST00000477554 TDRPQ86YL5 185 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 SHISA5Q8N114 240 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 ENDOVQ8N8Q3 282 aaKnown RBP16.93■□□□□ 0.3
PTPN7-209ENST00000477554 OR8K5Q8NH50 307 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms