RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 TAAR8Q969N4 342 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 ESAMQ96AP7 390 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 RHBDF1Q96CC6 855 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 C16orf58Q96GQ5 468 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 RAD9AQ99638 391 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 TRMT61BQ9BVS5 477 aaKnown RBP3.99□□□□□ -1.77
VPS13D-207ENST00000476169 SLC2A11Q9BYW1 496 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 MTMR12Q9C0I1 747 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 SLC39A8Q9C0K1 460 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 TMEM117Q9H0C3 514 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 ATG10Q9H0Y0 220 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 TFB2MQ9H5Q4 396 aaKnown RBP3.99□□□□□ -1.77
VPS13D-207ENST00000476169 TMEM231Q9H6L2 316 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 MAGEF1Q9HAY2 307 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 KCNMB3Q9NPA1 279 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 DONSONQ9NYP3 566 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 RAI14Q9P0K7 980 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 PTBP2Q9UKA9 531 aaKnown RBP3.99□□□□□ -1.77
VPS13D-207ENST00000476169 NAP1L2Q9ULW6 460 aaPredicted RBP3.99□□□□□ -1.77
VPS13D-207ENST00000476169 PCDHA12Q9UN75 941 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 KCNJ14Q9UNX9 436 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 ZNF510Q9Y2H8 683 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 SRPRBQ9Y5M8 271 aaKnown RBP3.99□□□□□ -1.77
VPS13D-207ENST00000476169 TOP2AP11388 1531 aaKnown RBP3.99□□□□□ -1.77
VPS13D-207ENST00000476169 UBE4BO95155 1302 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 PDS5BQ9NTI5 1447 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 ERICH4A6NGS2 130 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 FAM90A26D6RGX4 464 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 NDUFB8O95169 186 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 OR6A2O95222 327 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 MOCS2O96007 188 aaPredicted RBP3.98□□□□□ -1.77
VPS13D-207ENST00000476169 IGHV2-70P01814 119 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 EPCAMP16422 314 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 FUT1P19526 365 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 PRDX6P30041 224 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 SSTR1P30872 391 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 HNRNPH1P31943 449 aaKnown RBP3.98□□□□□ -1.77
VPS13D-207ENST00000476169 COMPP49747 757 aaPredicted RBP3.98□□□□□ -1.77
VPS13D-207ENST00000476169 MMP15P51511 669 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 CTSCP53634 463 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 C21orf58P58505 322 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 IRX4P78413 519 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 SLC34A1Q06495 639 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 ILF2Q12905 390 aaKnown RBP3.98□□□□□ -1.77
VPS13D-207ENST00000476169 GAGE2BQ13066 116 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 GPM6BQ13491 265 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 NONOQ15233 471 aaKnown RBP eCLIP3.98□□□□□ -1.77
VPS13D-207ENST00000476169 DECR1Q16698 335 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 SHROOM1Q2M3G4 852 aaPredicted RBP3.98□□□□□ -1.77
VPS13D-207ENST00000476169 Q4G0T1 1027 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 KCTD21Q4G0X4 260 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 MCMDC2Q4G0Z9 681 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 GAGE2EQ4V326 116 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 C18orf63Q68DL7 685 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 PM20D1Q6GTS8 502 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 LCN10Q6JVE6 187 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 GAGE2AQ6NT46 116 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 PARM1Q6UWI2 310 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 SIGLEC15Q6ZMC9 328 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 C15orf52Q6ZUT6 534 aaKnown RBP3.98□□□□□ -1.77
VPS13D-207ENST00000476169 MON1BQ7L1V2 547 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 COMMD2Q86X83 199 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 CDH26Q8IXH8 852 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.98□□□□□ -1.77
VPS13D-207ENST00000476169 OTUD6BQ8N6M0 293 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 AMER3Q8N944 861 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 CCDC63Q8NA47 563 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 MIGA1Q8NAN2 632 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 ACVR1CQ8NER5 493 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 BRSK1Q8TDC3 778 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 SLC26A7Q8TE54 656 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 SLC44A1Q8WWI5 657 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 SMPDL3BQ92485 455 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 SEMA4DQ92854 862 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 APOLD1Q96LR9 279 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 NECTIN4Q96NY8 510 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 SLC22A12Q96S37 553 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 MYADMQ96S97 322 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 CMKLR1Q99788 373 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 TRMOQ9BU70 441 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 RAB33BQ9H082 229 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 TMEM245Q9H330 911 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 SLA2Q9H6Q3 261 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 ECT2Q9H8V3 914 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 GORASP2Q9H8Y8 452 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 Q9N2K0 584 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 FZD3Q9NPG1 666 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 MIOSQ9NXC5 875 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 NPAP1Q9NZP6 1156 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 GAGE2DQ9UEU5 116 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 FAM153AQ9UHL3 310 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 NOCTQ9UK39 431 aaKnown RBP3.98□□□□□ -1.77
VPS13D-207ENST00000476169 FOXA2Q9Y261 457 aaPredicted RBP3.98□□□□□ -1.77
VPS13D-207ENST00000476169 JRKLQ9Y4A0 524 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 LOXL2Q9Y4K0 774 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 NME7Q9Y5B8 376 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 COX11Q9Y6N1 276 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 KDRP35968 1356 aa3.98□□□□□ -1.77
VPS13D-207ENST00000476169 FANCD2Q9BXW9 1451 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms