RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 MENTQ9BUN1 341 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 ZC3H7BQ9UGR2 993 aaKnown RBP12.01□□□□□ -0.49
SKA3-206ENST00000475251 KLK4Q9Y5K2 254 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 POLQO75417 2590 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 IGHV1-45A0A0A0MS14 117 aa12□□□□□ -0.49
SKA3-206ENST00000475251 OR5H15A6NDH6 313 aa12□□□□□ -0.49
SKA3-206ENST00000475251 IDSB3KWA1 339 aa12□□□□□ -0.49
SKA3-206ENST00000475251 PJA2O43164 708 aa12□□□□□ -0.49
SKA3-206ENST00000475251 CBFA2T2O43439 604 aa12□□□□□ -0.49
SKA3-206ENST00000475251 CLDN14O95500 239 aa12□□□□□ -0.49
SKA3-206ENST00000475251 WDPCPO95876 746 aa12□□□□□ -0.49
SKA3-206ENST00000475251 GAS8O95995 478 aa12□□□□□ -0.49
SKA3-206ENST00000475251 TPH1P17752 444 aa12□□□□□ -0.49
SKA3-206ENST00000475251 PSMA3P25788 255 aa12□□□□□ -0.49
SKA3-206ENST00000475251 MST1P26927 711 aa12□□□□□ -0.49
SKA3-206ENST00000475251 FOXN2P32314 431 aa12□□□□□ -0.49
SKA3-206ENST00000475251 CSE1LP55060 971 aaKnown RBP12□□□□□ -0.49
SKA3-206ENST00000475251 KCTD11Q693B1 232 aa12□□□□□ -0.49
SKA3-206ENST00000475251 C11orf63Q6NUN7 778 aa12□□□□□ -0.49
SKA3-206ENST00000475251 HIBCHQ6NVY1 386 aaPredicted RBP12□□□□□ -0.49
SKA3-206ENST00000475251 LINC00523Q86TU6 105 aa12□□□□□ -0.49
SKA3-206ENST00000475251 SPNS2Q8IVW8 549 aa12□□□□□ -0.49
SKA3-206ENST00000475251 C2orf73Q8N5S3 287 aaPredicted RBP12□□□□□ -0.49
SKA3-206ENST00000475251 MTFMTQ96DP5 389 aaKnown RBP12□□□□□ -0.49
SKA3-206ENST00000475251 CABS1Q96KC9 395 aa12□□□□□ -0.49
SKA3-206ENST00000475251 CARD6Q9BX69 1037 aa12□□□□□ -0.49
SKA3-206ENST00000475251 GPAMQ9HCL2 828 aa12□□□□□ -0.49
SKA3-206ENST00000475251 A0A0J9YVX5 310 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 MROH6A6NGR9 719 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 CTSVO60911 334 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 PHF2O75151 1096 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 VPS26AO75436 327 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 GPC4O75487 556 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 TJP3O95049 919 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 EIF2S1P05198 315 aaKnown RBP11.99□□□□□ -0.49
SKA3-206ENST00000475251 HEXBP07686 556 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 NUDT7P0C024 238 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 CCR7P32248 378 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 PTPN7P35236 360 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 MARCKSL1P49006 195 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 EEF1A2Q05639 463 aaKnown RBP11.99□□□□□ -0.49
SKA3-206ENST00000475251 GRB7Q14451 532 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 KRTCAP3Q53RY4 240 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 FAAH2Q6GMR7 532 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 AFTPHQ6ULP2 937 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 RNF44Q7L0R7 432 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 CDH24Q86UP0 819 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 CEP97Q8IW35 865 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 ZNF295-AS1Q8N0V1 137 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 EID3Q8N140 333 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 HMGCLL1Q8TB92 370 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 MAGEC3Q8TD91 643 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 THAP3Q8WTV1 239 aaPredicted RBP11.99□□□□□ -0.49
SKA3-206ENST00000475251 IL17FQ96PD4 163 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 ZFYVE21Q9BQ24 234 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 TUBB6Q9BUF5 446 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 YIPF2Q9BWQ6 316 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 OSBPL8Q9BZF1 889 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 GOLPH3Q9H4A6 298 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 MKKSQ9NPJ1 570 aaPredicted RBP11.99□□□□□ -0.49
SKA3-206ENST00000475251 STMN3Q9NZ72 180 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 TRPC4Q9UBN4 977 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 PCDHGB6Q9Y5F9 930 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 CELSR1Q9NYQ6 3014 aa11.99□□□□□ -0.49
SKA3-206ENST00000475251 CPAMD8Q8IZJ3 1885 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 LOC102723996A0A087X1L8 192 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 SYCE3A1L190 88 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 CCDC162PA2VCL2 907 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 OR51F1A6NGY5 319 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 KPNA5O15131 536 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 FANCGO15287 622 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 PRICKLE3O43900 615 aaPredicted RBP11.98□□□□□ -0.49
SKA3-206ENST00000475251 OR1I1O60431 355 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 MFAP3LO75121 409 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 F10P00742 488 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 ANXA5P08758 320 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 CCNFP41002 786 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 MAGEA1P43355 309 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 ADORA2A-AS1P86434 159 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 ZNF33BQ06732 778 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 TESK1Q15569 626 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 AARS2Q5JTZ9 985 aaKnown RBP11.98□□□□□ -0.49
SKA3-206ENST00000475251 FRMPD2BQ6IN97 320 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 CNGA4Q8IV77 575 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 DTWD1Q8N5C7 304 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 OR2L3Q8NG85 312 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 KRT35Q92764 455 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 CALR3Q96L12 384 aaKnown RBP11.98□□□□□ -0.49
SKA3-206ENST00000475251 FOPNLQ96NB1 174 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 PANX3Q96QZ0 392 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 SPOCK3Q9BQ16 436 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 MESP1Q9BRJ9 268 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 TGIF2Q9GZN2 237 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 ZNF700Q9H0M5 742 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 UTP6Q9NYH9 597 aaKnown RBP11.98□□□□□ -0.49
SKA3-206ENST00000475251 ANAPC5Q9UJX4 755 aa11.98□□□□□ -0.49
SKA3-206ENST00000475251 RCCD1A6NED2 376 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 GOLGA6L9A6NEM1 432 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 TXNDC9O14530 226 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 TTI1O43156 1089 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms