RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TGM7Q96PF1 710 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 OR4K3Q96R72 315 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 SGPP1Q9BX95 441 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 VPS11Q9H270 941 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 C12orf65Q9H3J6 166 aaKnown RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 EPB41L1Q9H4G0 881 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 STN1Q9H668 368 aaKnown RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 ALG9Q9H6U8 611 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 SYNDIG1Q9H7V2 258 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 INTS7Q9NVH2 962 aaKnown RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 ACTR10Q9NZ32 417 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 KLHL3Q9UH77 587 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 EMCNQ9ULC0 261 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 NOVA2Q9UNW9 492 aaKnown RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 CLCA2Q9UQC9 943 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 KLHL20Q9Y2M5 609 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 IKBKGQ9Y6K9 419 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 SCN2AQ99250 2005 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 FBN3Q75N90 2809 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 A0A087X1B8 175 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 IQANK1A0A1B0GTG1 560 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 A0A1B0GTL3 188 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 TLDC2A0PJX2 215 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 PIPSLA2A3N6 862 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 A8MU76 341 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 AGPSO00116 658 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 UBXN8O00124 270 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 KLK8O60259 260 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 PRAMEF4O60810 478 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 KERAO60938 352 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 GUCA1CO95843 209 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 SYF2O95926 243 aaKnown RBP6.73□□□□□ -1.33
LIMD1-204ENST00000474665 RPN2P04844 631 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 CTSBP07858 339 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ENO2P09104 434 aaPredicted RBP6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ANKRD34CP0C6C1 535 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 CCL4P13236 92 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 HGFP14210 728 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ST6GAL1P15907 406 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 NPPBP16860 134 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 EPORP19235 508 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ETV5P41161 510 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 GDF5P43026 501 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 GABRA4P48169 554 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 AGTR2P50052 363 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 PNLIPRP1P54315 467 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 INHBCP55103 352 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 AP1S2P56377 157 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 PCBP4P57723 403 aaKnown RBP6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ATP6V0D1P61421 351 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 SH3BP2P78314 561 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 CDKL1Q00532 357 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 SLC18A2Q05940 514 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 NAE1Q13564 534 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 KCNAB1Q14722 419 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ARHGAP19Q14CB8 494 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 MAP9Q49MG5 647 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 TECRLQ5HYJ1 363 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 SNAP47Q5SQN1 464 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 PRAMEF9Q5VWM5 478 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 C16orf46Q6P387 395 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 SPESP1Q6UW49 350 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 PRSS42Q7Z5A4 293 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 CCDC91Q7Z6B0 441 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ADAMTSL2Q86TH1 951 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 TBC1D1Q86TI0 1168 aaPredicted RBP6.73□□□□□ -1.33
LIMD1-204ENST00000474665 TRABD2AQ86V40 505 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 OOSP2Q86WS3 158 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 PLXDC1Q8IUK5 500 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 FAM26EQ8N5C1 309 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 OR56A3Q8NH54 315 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 WDR48Q8TAF3 677 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 MCOLN3Q8TDD5 553 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ACMSDQ8TDX5 336 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 KLHL6Q8WZ60 621 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ESAMQ96AP7 390 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 PYCR2Q96C36 320 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 MTBPQ96DY7 904 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 AHCYL2Q96HN2 611 aaKnown RBP6.73□□□□□ -1.33
LIMD1-204ENST00000474665 SLC41A2Q96JW4 573 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 CCDC138Q96M89 665 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 TRAPPC9Q96Q05 1148 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 CCDC77Q9BR77 488 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 TMEM79Q9BSE2 394 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ROPN1BQ9BZX4 212 aaPredicted RBP6.73□□□□□ -1.33
LIMD1-204ENST00000474665 KLHL25Q9H0H3 589 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ATG10Q9H0Y0 220 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 PPCSQ9HAB8 311 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ROPN1Q9HAT0 212 aaPredicted RBP6.73□□□□□ -1.33
LIMD1-204ENST00000474665 NMRAL1Q9HBL8 299 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 FAM60AQ9NP50 221 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 SLC6A20Q9NP91 592 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 PCMTD2Q9NV79 361 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 OCIAD1Q9NX40 245 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 SIDT1Q9NXL6 827 aaKnown RBP6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ARL15Q9NXU5 204 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 TMEM216Q9P0N5 145 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 SPATA7Q9P0W8 599 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 PTBP2Q9UKA9 531 aaKnown RBP6.73□□□□□ -1.33
LIMD1-204ENST00000474665 OARD1Q9Y530 152 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms