RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 TRMT6Q9UJA5 497 aaKnown RBP17.19■□□□□ 0.34
UPF3A-203ENST00000474056 DOCK10Q96BY6 2186 aa17.19■□□□□ 0.34
UPF3A-203ENST00000474056 OR2A25A4D2G3 310 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 EIF3FO00303 357 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-203ENST00000474056 ZBTB14O43829 449 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 ITGAXP20702 1163 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 ALAS2P22557 587 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 CMPK1P30085 196 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 RPA3P35244 121 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-203ENST00000474056 RPL21P46778 160 aaKnown RBP17.18■□□□□ 0.34
UPF3A-203ENST00000474056 ARSFP54793 590 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 CDKN2DP55273 166 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 VSX2P58304 361 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-203ENST00000474056 TCTE1Q5JU00 501 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 TEDDM1Q5T9Z0 273 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 UGT3A1Q6NUS8 523 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 MRPL14Q6P1L8 145 aaKnown RBP17.18■□□□□ 0.34
UPF3A-203ENST00000474056 KIAA0408Q6ZU52 694 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 UBE2R2Q712K3 238 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-203ENST00000474056 ANKMY2Q8IV38 441 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 TMEM151BQ8IW70 566 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 TTC29Q8NA56 475 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-203ENST00000474056 DLG3Q92796 817 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 LRRC39Q96DD0 335 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 C17orf62Q9BQA9 187 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 MRPS30Q9NP92 439 aaKnown RBP17.18■□□□□ 0.34
UPF3A-203ENST00000474056 SLC22A11Q9NSA0 550 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 CUTCQ9NTM9 273 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 IFT80Q9P2H3 777 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-203ENST00000474056 NDOR1Q9UHB4 597 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 GPN3Q9UHW5 284 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-203ENST00000474056 PADI2Q9Y2J8 665 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 SNX24Q9Y343 169 aa17.18■□□□□ 0.34
UPF3A-203ENST00000474056 LOC105369274A0A096LPK9 316 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 IGKV1-8A0A0C4DH67 115 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 LOC102723532A0A0G2JNH3 316 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 A0A1B0GX78 115 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 E7ENX8 843 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 PDGFAP04085 211 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 IMPA1P29218 277 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 HSD17B2P37059 387 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 PGGT1BP53609 377 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 TAP2Q03519 686 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 GRM7Q14831 915 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 FASTKD3Q14CZ7 662 aaKnown RBP17.17■□□□□ 0.34
UPF3A-203ENST00000474056 NKAIN1Q4KMZ8 207 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 COLEC12Q5KU26 742 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 WASHC2DQ5SRD0 308 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 TCTN3Q6NUS6 607 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 PAQR3Q6TCH7 311 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 ATG14Q6ZNE5 492 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 GALNT7Q86SF2 657 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 LRRC56Q8IYG6 542 aaPredicted RBP17.17■□□□□ 0.34
UPF3A-203ENST00000474056 OR4N4Q8N0Y3 316 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 DTWD1Q8N5C7 304 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 EEF1AKMT1Q8WVE0 214 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 ING2Q9H160 280 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 SYNPO2LQ9H987 977 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 ACSS2Q9NR19 701 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 ENAMQ9NRM1 1142 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 ABCF3Q9NUQ8 709 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 TAS2R13Q9NYV9 303 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 ADAMTS6Q9UKP5 1117 aa17.17■□□□□ 0.34
UPF3A-203ENST00000474056 PTRH2Q9Y3E5 179 aaKnown RBP17.17■□□□□ 0.34
UPF3A-203ENST00000474056 FITM1A5D6W6 292 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 ZNF839A8K0R7 811 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 DSCR3O14972 297 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 OTX2P32243 289 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 FOLR3P41439 243 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 SKIV2L2P42285 1042 aaKnown RBP17.16■□□□□ 0.34
UPF3A-203ENST00000474056 C2orf54Q08AI8 447 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 PDIA2Q13087 525 aaKnown RBP17.16■□□□□ 0.34
UPF3A-203ENST00000474056 ATP1A4Q13733 1029 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 NAA25Q14CX7 972 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 ICE2Q659A1 982 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 COX15Q7KZN9 410 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 RAB43Q86YS6 212 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 METTL27Q8N6F8 245 aaPredicted RBP17.16■□□□□ 0.34
UPF3A-203ENST00000474056 GPATCH11Q8N954 259 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 FBXO36Q8NEA4 188 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 SPATA4Q8NEY3 305 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.16■□□□□ 0.34
UPF3A-203ENST00000474056 ZFYVE21Q9BQ24 234 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 PLCD4Q9BRC7 762 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 ANKMY1Q9P2S6 941 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 NBASA2RRP1 2371 aa17.16■□□□□ 0.34
UPF3A-203ENST00000474056 SCN3AQ9NY46 2000 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 E7ESA3 106 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 RAD51CO43502 376 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 SRPX2O60687 465 aaPredicted RBP17.15■□□□□ 0.34
UPF3A-203ENST00000474056 MED26O95402 600 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 CASQ1P31415 396 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 RGS4P49798 205 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 CCL11P51671 97 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 PRDX1Q06830 199 aaKnown RBP17.15■□□□□ 0.34
UPF3A-203ENST00000474056 SSPNQ14714 243 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 HECTD2Q5U5R9 776 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 YOD1Q5VVQ6 348 aaPredicted RBP17.15■□□□□ 0.34
UPF3A-203ENST00000474056 LRRC8EQ6NSJ5 796 aa17.15■□□□□ 0.34
UPF3A-203ENST00000474056 FBXO42Q6P3S6 717 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms