RNA–Protein interactions for RNA: ENST00000471681.5

CCDC66-213, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 3,120 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-213ENST00000471681 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 TRAV20A0A0B4J274 112 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 BLACEA4D250 179 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 FITM1A5D6W6 292 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 OTOL1A6NHN0 477 aaPredicted RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 B4E171 279 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 RASGRF2O14827 1237 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 TBX1O43435 398 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 PROM1O43490 865 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 FMO6PO60774 539 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 H2AFYO75367 372 aaKnown RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 TULP3O75386 442 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 SLITRK5O94991 958 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 SCELO95171 688 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 ZBTB11O95625 1053 aaPredicted RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 KRT75O95678 551 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 C9P02748 559 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 EIF2S1P05198 315 aaKnown RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 OR4Q2P0C623 313 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 C6P13671 934 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 TGM1P22735 817 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 HRH2P25021 359 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 TSFMP43897 325 aaKnown RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 GSSP48637 474 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 SERPINB9P50453 376 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 TPI1P60174 286 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 EIF3EP60228 445 aaKnown RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 UBE2IP63279 158 aaKnown RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 CDH17Q12864 832 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 ZNF177Q13360 481 aaPredicted RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 SNTA1Q13424 505 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 POLD3Q15054 466 aaPredicted RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 MGAT5BQ3V5L5 792 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 AARS2Q5JTZ9 985 aaKnown RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 C6orf163Q5TEZ5 329 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 OR52E8Q6IFG1 317 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 CASC4Q6P4E1 433 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 SUSD1Q6UWL2 747 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 TMC5Q6UXY8 1006 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 C12orf40Q86WS4 652 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 OR2T34Q8NGX1 318 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 DLG3Q92796 817 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 L3HYPDHQ96EM0 354 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 HMCESQ96FZ2 354 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 GPR22Q99680 433 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 ZSCAN5AQ9BUG6 496 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 TRIM15Q9C019 465 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 TINAGL1Q9GZM7 467 aaPredicted RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 SMG9Q9H0W8 520 aaKnown RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 RIMS4Q9H426 269 aaPredicted RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 SYTL2Q9HCH5 934 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 FAM49BQ9NUQ9 324 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 FAM86C1Q9NVL1 165 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 WSB2Q9NYS7 404 aaPredicted RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 CFAP97Q9P2B7 532 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 UBA2Q9UBT2 640 aaPredicted RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 NDOR1Q9UHB4 597 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 BAIAP2L1Q9UHR4 511 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 APPL1Q9UKG1 709 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 PRG3Q9Y2Y8 225 aaPredicted RBP3.41□□□□□ -1.86
CCDC66-213ENST00000471681 LRRC42Q9Y546 428 aa3.41□□□□□ -1.86
CCDC66-213ENST00000471681 LRRC14BA6NHZ5 514 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 HSBP1L1C9JCN9 74 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 I3L4J1 428 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 HTR3BO95264 441 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 IGSF6O95976 241 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 HLA-DQB2P05538 268 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 XRCC1P18887 633 aaPredicted RBP3.4□□□□□ -1.86
CCDC66-213ENST00000471681 CD58P19256 250 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 ITGAXP20702 1163 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 TLX1P31314 330 aaPredicted RBP3.4□□□□□ -1.86
CCDC66-213ENST00000471681 MARCKSL1P49006 195 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 PCYT1AP49585 367 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 PRLHRP49683 370 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 KCNQ1P51787 676 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 ATXN1P54253 815 aaKnown RBP3.4□□□□□ -1.86
CCDC66-213ENST00000471681 ACTR1AP61163 376 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 TRA2BP62995 288 aaKnown RBP3.4□□□□□ -1.86
CCDC66-213ENST00000471681 PHC1P78364 1004 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 TXNL4AP83876 142 aaKnown RBP3.4□□□□□ -1.86
CCDC66-213ENST00000471681 SCRN3Q0VDG4 424 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 GRIK2Q13002 908 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 STARD3Q14849 445 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 CEBPEQ15744 281 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 CNPY1Q3B7I2 92 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 ODF2Q5BJF6 829 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 LDLRAP1Q5SW96 308 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 PXDC1Q5TGL8 231 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 PMS2CLQ68D20 193 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 MBLAC2Q68D91 279 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 ZNF776Q68DI1 518 aaPredicted RBP3.4□□□□□ -1.86
CCDC66-213ENST00000471681 FDX2Q6P4F2 183 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 PAOXQ6QHF9 649 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 GPR155Q7Z3F1 870 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 SPRED2Q7Z698 418 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 KMT5CQ86Y97 462 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 ARL14Q8N4G2 192 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 CPSF7Q8N684 471 aaKnown RBP3.4□□□□□ -1.86
CCDC66-213ENST00000471681 OR4K1Q8NGD4 311 aa3.4□□□□□ -1.86
CCDC66-213ENST00000471681 FLVCR1-AS1Q8TAF5 88 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms