RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 PTGR1Q14914 329 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 PRPF38BQ5VTL8 546 aaKnown RBP17.53■□□□□ 0.4
SMC4-211ENST00000469858 RIPOR1Q6ZS17 1223 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 FBXW8Q8N3Y1 598 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 LIX1Q8N485 282 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 PCYOX1LQ8NBM8 494 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 SLC5A11Q8WWX8 675 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 BIRC7Q96CA5 298 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 ACAT2Q9BWD1 397 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 ACTL8Q9H568 366 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 WSB2Q9NYS7 404 aaPredicted RBP17.53■□□□□ 0.4
SMC4-211ENST00000469858 NDUFAF1Q9Y375 327 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 LRP4O75096 1905 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 C10orf142B7Z368 130 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 H0YIV9 168 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 PCNAP12004 261 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 CD6P30203 668 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 CASP2P42575 452 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 CCR5P51681 352 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 MTTPP55157 894 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 PSME3P61289 254 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 KRT33BQ14525 404 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 ARHGAP19Q14CB8 494 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 TRMT5Q32P41 509 aaKnown RBP17.53■□□□□ 0.4
SMC4-211ENST00000469858 UAP1L1Q3KQV9 507 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 CACHD1Q5VU97 1274 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 ADNP2Q6IQ32 1131 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 GPR153Q6NV75 609 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 Q6ZSR6 202 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 FAM160A2Q8N612 972 aaPredicted RBP17.53■□□□□ 0.4
SMC4-211ENST00000469858 VPS33AQ96AX1 596 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 MENTQ9BUN1 341 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 PNMA8BQ9ULN7 279 aaPredicted RBP17.53■□□□□ 0.4
SMC4-211ENST00000469858 PCDHGA7Q9Y5G6 932 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 PCDHGA11Q9Y5H2 935 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 FANCMQ8IYD8 2048 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 SERTM1A2A2V5 107 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 FAM234BA2RU67 622 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 CCDC154A6NI56 674 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 PRAMEF26H0Y7S4 382 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 ANKRD28O15084 1053 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 AK4P27144 223 aaPredicted RBP17.52■□□□□ 0.4
SMC4-211ENST00000469858 OXTRP30559 389 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 ERFP50548 548 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 YPEL5P62699 121 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 CSTF3Q12996 717 aaKnown RBP17.52■□□□□ 0.4
SMC4-211ENST00000469858 E2F2Q14209 437 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 SLBPQ14493 270 aaKnown RBP eCLIP17.52■□□□□ 0.4
SMC4-211ENST00000469858 KIAA0040Q15053 153 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 ATG9BQ674R7 924 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 MED27Q6P2C8 311 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 LCTLQ6UWM7 567 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 OR7G3Q8NG95 312 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 CMTM7Q96FZ5 175 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 SERPINI1Q99574 410 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 IL1RL2Q9HB29 575 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 SLC52A3Q9NQ40 469 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 SPATA7Q9P0W8 599 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 HS3ST3A1Q9Y663 406 aa17.52■□□□□ 0.4
SMC4-211ENST00000469858 A0A1W2PP18 115 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 RASGRP1O95267 797 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 C1GALT1C1LP0DN25 315 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 PRPH2P23942 346 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 HSD17B2P37059 387 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 PXNP49023 591 aaPredicted RBP17.51■□□□□ 0.39
SMC4-211ENST00000469858 ZNF33BQ06732 778 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 CYP2A13Q16696 494 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 TIGD2Q4W5G0 525 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 RAB42Q8N4Z0 105 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 RNF148Q8N7C7 305 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 OR13H1Q8NG92 308 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 SETD7Q8WTS6 366 aaKnown RBP17.51■□□□□ 0.39
SMC4-211ENST00000469858 TSPEARQ8WU66 669 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 SNX19Q92543 992 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 SH3KBP1Q96B97 665 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 APIPQ96GX9 242 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 CAMK1GQ96NX5 476 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 SLC39A3Q9BRY0 314 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 HAUS8Q9BT25 410 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 EFCAB11Q9BUY7 163 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 ASIC5Q9NY37 505 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 ADA2Q9NZK5 511 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 MAP10Q9P2G4 905 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 TAC3Q9UHF0 121 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 CROTQ9UKG9 612 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 DLGAP4Q9Y2H0 992 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 ZNF839A8K0R7 811 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 MAGEB17A8MXT2 336 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 ZNF217O75362 1048 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 CDH1P12830 882 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 JAK1P23458 1154 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 SRP54P61011 504 aaKnown RBP17.51■□□□□ 0.39
SMC4-211ENST00000469858 CTBSQ01459 385 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 MEF2AQ02078 507 aaPredicted RBP17.51■□□□□ 0.39
SMC4-211ENST00000469858 PIGGQ5H8A4 983 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 PAGE2BQ5JRK9 111 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 NXPE4Q6UWF7 544 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 HACD2Q6Y1H2 254 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 CLHC1Q8NHS4 586 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 CCL4L1Q8NHW4 92 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms