RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 SLC22A14Q9Y267 594 aa14.25□□□□□ -0.13
COL9A3-209ENST00000469852 PLLPQ9Y342 182 aa14.25□□□□□ -0.13
COL9A3-209ENST00000469852 HEATR5BQ9P2D3 2071 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 WDFY3Q8IZQ1 3526 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 A0A0J9YY10 115 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 GOLGA6L10A6NI86 522 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 SLC9B1P1A6NJY1 282 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 ZNF839A8K0R7 811 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 HYAL3O43820 417 aaPredicted RBP14.24□□□□□ -0.13
COL9A3-209ENST00000469852 DLX3O60479 287 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 RASSF9O75901 435 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 WDR47O94967 919 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 S100BP04271 92 aaPredicted RBP14.24□□□□□ -0.13
COL9A3-209ENST00000469852 CDK4P11802 303 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 NPPBP16860 134 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 CDH3P22223 829 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 CCKBRP32239 447 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 HNMTP50135 292 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 MAGOHP61326 146 aaKnown RBP14.24□□□□□ -0.13
COL9A3-209ENST00000469852 SHC2P98077 582 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 TARDBPQ13148 414 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL9A3-209ENST00000469852 THEMIS2Q5TEJ8 643 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 ICE2Q659A1 982 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 FCRL6Q6DN72 434 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 CAPN13Q6MZZ7 669 aaPredicted RBP14.24□□□□□ -0.13
COL9A3-209ENST00000469852 RPS27LQ71UM5 84 aaKnown RBP14.24□□□□□ -0.13
COL9A3-209ENST00000469852 ARMC2Q8NEN0 867 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 UBTD2Q8WUN7 234 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 MOCOSQ96EN8 888 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 FAM111AQ96PZ2 611 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 DPYSL5Q9BPU6 564 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 CD244Q9BZW8 370 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 SEMA5BQ9P283 1151 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 PCDHB11Q9Y5F2 797 aa14.24□□□□□ -0.13
COL9A3-209ENST00000469852 HCRTR1O43613 425 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 CCNT2O60583 730 aaKnown RBP14.23□□□□□ -0.13
COL9A3-209ENST00000469852 PRAMEF4O60810 478 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 SMIM24O75264 130 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 STK16O75716 305 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 ANKRD34CP0C6C1 535 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 EPORP19235 508 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 GRIA3P42263 894 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 ALDH18A1P54886 795 aaKnown RBP14.23□□□□□ -0.13
COL9A3-209ENST00000469852 PRDX1Q06830 199 aaKnown RBP14.23□□□□□ -0.13
COL9A3-209ENST00000469852 FOXC1Q12948 553 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 KCNAB1Q14722 419 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 CCDC153Q494R4 210 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 AGBL2Q5U5Z8 902 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 PRAMEF9Q5VWM5 478 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 LCTLQ6UWM7 567 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 ZYG11AQ6WRX3 759 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 TMPRSS7Q7RTY8 843 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 TMPRSS12Q86WS5 348 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 TCAIMQ8N3R3 496 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 KLHL6Q8WZ60 621 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 SLC22A18Q96BI1 424 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 SLC41A2Q96JW4 573 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 TMEM74Q96NL1 305 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 DEPDC7Q96QD5 511 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 CD180Q99467 661 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 ZNF768Q9H5H4 540 aaKnown RBP14.23□□□□□ -0.13
COL9A3-209ENST00000469852 SYNPO2LQ9H987 977 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 FAM60AQ9NP50 221 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 C1GALT1Q9NS00 363 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 ACTL7BQ9Y614 415 aa14.23□□□□□ -0.13
COL9A3-209ENST00000469852 CFAP47Q6ZTR5 3102 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 CDH1P12830 882 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 HGFP14210 728 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 JUPP14923 745 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 SPINK2P20155 84 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 CCND1P24385 295 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 EEF1DP29692 281 aaKnown RBP14.22□□□□□ -0.13
COL9A3-209ENST00000469852 CMPK1P30085 196 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 ETV4P43268 484 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 SH3BP2P78314 561 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 NFKB2Q00653 900 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 PCLAFQ15004 111 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 PCBP2Q15366 365 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL9A3-209ENST00000469852 CATSPEREQ5SY80 951 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 FAM219BQ5XKK7 198 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 C19orf47Q8N9M1 422 aaKnown RBP14.22□□□□□ -0.13
COL9A3-209ENST00000469852 NEIL2Q969S2 332 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 ATP6V1G3Q96LB4 118 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 NSUN5Q96P11 429 aaKnown RBP14.22□□□□□ -0.13
COL9A3-209ENST00000469852 TMEM237Q96Q45 408 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 DPH7Q9BTV6 452 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 MECRQ9BV79 373 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 IQCGQ9H095 443 aaKnown RBP14.22□□□□□ -0.13
COL9A3-209ENST00000469852 SPNS1Q9H2V7 528 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 SSU72Q9NP77 194 aaKnown RBP14.22□□□□□ -0.13
COL9A3-209ENST00000469852 MRPS30Q9NP92 439 aaKnown RBP14.22□□□□□ -0.13
COL9A3-209ENST00000469852 DNAJC11Q9NVH1 559 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 OCIAD1Q9NX40 245 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 WASF3Q9UPY6 502 aa14.22□□□□□ -0.13
COL9A3-209ENST00000469852 E7EQ34 232 aa14.21□□□□□ -0.13
COL9A3-209ENST00000469852 STX16-NPEPL1H3BU86 382 aa14.21□□□□□ -0.13
COL9A3-209ENST00000469852 H7BY64 318 aa14.21□□□□□ -0.13
COL9A3-209ENST00000469852 E2F3O00716 465 aa14.21□□□□□ -0.13
COL9A3-209ENST00000469852 STX16O14662 325 aa14.21□□□□□ -0.13
COL9A3-209ENST00000469852 TOX3O15405 576 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms