RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 CSNK2A2P19784 350 aaPredicted RBP13.43□□□□□ -0.26
BRAT1-203ENST00000467558 DGKEP52429 567 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 OLR1P78380 273 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 FAM189BP81408 668 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 ALG11Q2TAA5 492 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 OXR1Q8N573 874 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 FAM81AQ8TBF8 368 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 PLEKHG4BQ96PX9 1271 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 ZNF347Q96SE7 839 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 TMEM27Q9HBJ8 222 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 SPO11Q9Y5K1 396 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 A0A0G2JN53 185 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 ENGP17813 658 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 GRIA2P42262 883 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 CDH12P55289 794 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 MGAT3Q09327 533 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 ABHD18Q0P651 414 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 DUOXA1Q1HG43 343 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 LUZP2Q86TE4 346 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 KBTBD6Q86V97 674 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 ADGRG2Q8IZP9 1017 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 TRPV3Q8NET8 790 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 DNASE1L2Q92874 299 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 ZHX1-C8orf76Q96EF9 292 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 KLHL1Q9NR64 748 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 TESMINQ9Y4I5 508 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 PRSS51A0A1B0GVH4 220 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 ADAM12O43184 909 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 SLC25A12O75746 678 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 CKMT2P17540 419 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 ALAS2P22557 587 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 SLC6A4P31645 630 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 GMPRP36959 345 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 CAPGP40121 348 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 VIPR2P41587 438 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 MTTPP55157 894 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 NTHL1P78549 312 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 GALNT1Q10472 559 aaPredicted RBP13.42□□□□□ -0.26
BRAT1-203ENST00000467558 PPP1R3AQ16821 1122 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 LIN52Q52LA3 116 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 PDZK1Q5T2W1 519 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 TNFAIP8L2Q6P589 184 aaPredicted RBP13.42□□□□□ -0.26
BRAT1-203ENST00000467558 CPXM2Q8N436 756 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 GPR150Q8NGU9 434 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 KHSRPQ92945 711 aaKnown RBP eCLIP13.42□□□□□ -0.26
BRAT1-203ENST00000467558 COQ6Q9Y2Z9 468 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 ERI3O43414 337 aaKnown RBP13.42□□□□□ -0.26
BRAT1-203ENST00000467558 GRIK2Q13002 908 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 LIPJQ5W064 366 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 NEK5Q6P3R8 708 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 RNF44Q7L0R7 432 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 OR5K1Q8NHB7 308 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 PIH1D2Q8WWB5 315 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 EPB41L1Q9H4G0 881 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 MEAF6Q9HAF1 191 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 VEGFDO43915 354 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 CD247P20963 164 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 KHKP50053 298 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 ZNF155Q12901 538 aaPredicted RBP13.42□□□□□ -0.26
BRAT1-203ENST00000467558 MINDY4Q4G0A6 757 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 HTR3DQ70Z44 454 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 PACRGLQ8N7B6 248 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 SNRNP27Q8WVK2 155 aaKnown RBP13.42□□□□□ -0.26
BRAT1-203ENST00000467558 SLITRK2Q9H156 845 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 CD320Q9NPF0 282 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 HCSTQ9UBK5 93 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 FZD4Q9ULV1 537 aa13.42□□□□□ -0.26
BRAT1-203ENST00000467558 COL24A1Q17RW2 1714 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 DUXAA6NLW8 204 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 EIF3FO00303 357 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 ATF6P18850 670 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 CRISP3P54108 245 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 RUNX3Q13761 415 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 RTL10Q7L3V2 364 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 SYVN1Q86TM6 617 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 POMGNT2Q8NAT1 580 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 LRCH3Q96II8 777 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 KXD1Q9BQD3 176 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 SLC35A5Q9BS91 424 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 GSDMCQ9BYG8 508 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 CAB39Q9Y376 341 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 PCDHB11Q9Y5F2 797 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 PRORSD1PA6NEY8 169 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 KPNA4O00629 521 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 EI24O14681 340 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 MFN2O95140 757 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 TNFP01375 233 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 PRG2P13727 222 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 ZNF8P17098 575 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 LSM3P62310 102 aaKnown RBP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 RPS21P63220 83 aaKnown RBP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 MED22Q15528 200 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 HEATR4Q86WZ0 1026 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 CBARPQ8N350 705 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 AVL9Q8NBF6 648 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 OR51B5Q9H339 312 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 SERHL2Q9H4I8 314 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 SERHLQ9NQF3 203 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 PRKAB1Q9Y478 270 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms