RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 ZMYND12Q9H0C1 365 aa2.35□□□□□ -2.03
CNOT11-203ENST00000462489 CNOT10Q9H9A5 744 aaKnown RBP2.35□□□□□ -2.03
CNOT11-203ENST00000462489 CDH20Q9HBT6 801 aa2.35□□□□□ -2.03
CNOT11-203ENST00000462489 TERF2IPQ9NYB0 399 aa2.35□□□□□ -2.03
CNOT11-203ENST00000462489 PAK5Q9P286 719 aa2.35□□□□□ -2.03
CNOT11-203ENST00000462489 C19orf25Q9UFG5 118 aaPredicted RBP2.35□□□□□ -2.03
CNOT11-203ENST00000462489 PPP1R3CQ9UQK1 317 aa2.35□□□□□ -2.03
CNOT11-203ENST00000462489 TNNQ9UQP3 1299 aa2.35□□□□□ -2.03
CNOT11-203ENST00000462489 RPS6KL1Q9Y6S9 549 aa2.35□□□□□ -2.03
CNOT11-203ENST00000462489 IGKV3D-20A0A0C4DH25 116 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 MEX3AA1L020 520 aaKnown RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 CASTOR2A6NHX0 329 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 ERI2A8K979 691 aaKnown RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 MPTX1A8MV57 137 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 CLDN4O14493 209 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 DDHD2O94830 711 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 SORBS2O94875 1100 aaKnown RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 MOCS3O95396 460 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 FYNP06241 537 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 ATP5BP06576 529 aaKnown RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 CSN3P07498 182 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 SLC2A2P11168 524 aaPredicted RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 CYP2A7P20853 494 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 HLA-FP30511 346 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 HNF4AP41235 474 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 CSE1LP55060 971 aaKnown RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 POLR2LP62875 67 aaKnown RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 GCNT1Q02742 428 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 DRP2Q13474 957 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 EFTUD2Q15029 972 aaKnown RBP eCLIP2.34□□□□□ -2.032e-8■□□□□ 8.6
CNOT11-203ENST00000462489 NPTX1Q15818 432 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 ERMARDQ5T6L9 678 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 IL27RAQ6UWB1 636 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 LEKR1Q6ZMV7 388 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 Q6ZRP5 223 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 BTN2A1Q7KYR7 527 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 PTAR1Q7Z6K3 402 aaPredicted RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 CENPVQ7Z7K6 275 aaPredicted RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 LRRTM1Q86UE6 522 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 IQCHQ86VS3 1027 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 LGI2Q8N0V4 545 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 LYG1Q8N1E2 194 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 XXYLT1Q8NBI6 393 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 GPRC5AQ8NFJ5 357 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 MAPK15Q8TD08 544 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 SMAP2Q8WU79 429 aaPredicted RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 APOBEC4Q8WW27 367 aaKnown RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 ANKRD9Q96BM1 317 aaPredicted RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 THOC1Q96FV9 657 aaKnown RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 FAM71F1Q96KD3 344 aaPredicted RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 C4orf45Q96LM5 186 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 LPAR4Q99677 370 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 MAP3K3Q99759 626 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 CPNE1Q99829 537 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 EGFL8Q99944 293 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 PKP2Q99959 881 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 VGLL1Q99990 258 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 CPSF3Q9UKF6 684 aaKnown RBP2.34□□□□□ -2.03
CNOT11-203ENST00000462489 WDR83OSQ9Y284 106 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 PPP2R2CQ9Y2T4 447 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 TMED3Q9Y3Q3 217 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 TTLL3Q9Y4R7 772 aa2.34□□□□□ -2.03
CNOT11-203ENST00000462489 TRAV24A0A0B4J272 114 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 TRBV5-5A0A0J9YX44 114 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 A0A0U1RQG5 324 aaPredicted RBP2.33□□□□□ -2.04
CNOT11-203ENST00000462489 A0A1W2PPK0 400 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 TEX28O15482 410 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 CRLF1O75462 422 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 CEACAM4O75871 244 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 DARSP14868 501 aaKnown RBP2.33□□□□□ -2.04
CNOT11-203ENST00000462489 AKR1B1P15121 316 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 CD22P20273 847 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 SP100P23497 879 aaPredicted RBP2.33□□□□□ -2.04
CNOT11-203ENST00000462489 RAD52P43351 418 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 CAPZA2P47755 286 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 RAB28P51157 221 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 CSNK2BP67870 215 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 MYL7Q01449 175 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 RALGDSQ12967 914 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 VEZF1Q14119 521 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 ZNF74Q16587 644 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 MTHFSDQ2M296 383 aaKnown RBP2.33□□□□□ -2.04
CNOT11-203ENST00000462489 GLIPR1L2Q4G1C9 344 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 C6orf163Q5TEZ5 329 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 OR4A47Q6IF82 309 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 IL17RELQ6ZVW7 336 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 RYBPQ8N488 228 aaPredicted RBP2.33□□□□□ -2.04
CNOT11-203ENST00000462489 FAM89BQ8N5H3 189 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 RASGEF1AQ8N9B8 481 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 NOA1Q8NC60 698 aaKnown RBP2.33□□□□□ -2.04
CNOT11-203ENST00000462489 OR6S1Q8NH40 331 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 VANGL1Q8TAA9 524 aaPredicted RBP2.33□□□□□ -2.04
CNOT11-203ENST00000462489 ROBO4Q8WZ75 1007 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 HDAC11Q96DB2 347 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 PGAP3Q96FM1 320 aaPredicted RBP2.33□□□□□ -2.04
CNOT11-203ENST00000462489 C18orf12Q96KH6 178 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 LINC00615Q96LM1 132 aaPredicted RBP2.33□□□□□ -2.04
CNOT11-203ENST00000462489 ZNF300Q96RE9 604 aaPredicted RBP2.33□□□□□ -2.04
CNOT11-203ENST00000462489 SLF1Q9BQI6 1058 aa2.33□□□□□ -2.04
CNOT11-203ENST00000462489 MED20Q9H944 212 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms