RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 SORBS2O94875 1100 aaKnown RBP9.58□□□□□ -0.88
HDLBP-228ENST00000459788 CYC1P08574 325 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 EZRP15311 586 aaKnown RBP9.58□□□□□ -0.88
HDLBP-228ENST00000459788 CCND1P24385 295 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 RPA3P35244 121 aaPredicted RBP9.58□□□□□ -0.88
HDLBP-228ENST00000459788 SLC1A2P43004 574 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 CARSP49589 748 aaKnown RBP9.58□□□□□ -0.88
HDLBP-228ENST00000459788 CCL11P51671 97 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 AIMP2Q13155 320 aaKnown RBP9.58□□□□□ -0.88
HDLBP-228ENST00000459788 SP140Q13342 867 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 ATP1A4Q13733 1029 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 MYBPC3Q14896 1274 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 MORF4L2Q15014 288 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 PPP1R7Q15435 360 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 MUM1Q2TAK8 710 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 DEFB110Q30KQ9 67 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 ACSBG2Q5FVE4 666 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 SPANXN3Q5MJ09 141 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 DCAF10Q5QP82 559 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 CPZQ66K79 652 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 CNSTQ6PJW8 725 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 TTLL10Q6ZVT0 673 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 GALNT11Q8NCW6 608 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 TM9SF4Q92544 642 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 ANP32BQ92688 251 aaKnown RBP9.58□□□□□ -0.88
HDLBP-228ENST00000459788 PNPLA2Q96AD5 504 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 ZFYVE21Q9BQ24 234 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 PLCD4Q9BRC7 762 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 TRIM4Q9C037 500 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 ATP13A2Q9NQ11 1180 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 C20orf96Q9NUD7 363 aaPredicted RBP9.58□□□□□ -0.88
HDLBP-228ENST00000459788 P4HTMQ9NXG6 502 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 DHCR7Q9UBM7 475 aaKnown RBP9.58□□□□□ -0.88
HDLBP-228ENST00000459788 FBXO5Q9UKT4 447 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 MAD1L1Q9Y6D9 718 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 SPENQ96T58 3664 aaKnown RBP9.58□□□□□ -0.88
HDLBP-228ENST00000459788 PCSK5Q92824 1860 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 IGLV3-12A0A075B6K2 115 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 KCNE1BA0A087WTH5 132 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 A0A1W2PQ72 361 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 HYKKA2RU49 373 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 VSTM2BA6NLU5 285 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 GOLGA8KD6RF30 607 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 E7ENX8 843 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 GOLGA8TH3BQL2 631 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 CCDC188H7C350 402 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 K7EM74 188 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 CTSVO60911 334 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 DNAJB5O75953 348 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 PDGFAP04085 211 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 C8GP07360 202 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 UMODP07911 640 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 ALAS2P22557 587 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 BDKRB1P46663 353 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 RGS4P49798 205 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 PNLIPRP1P54315 467 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 TAP2Q03519 686 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 CTBP1Q13363 440 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 CRYMQ14894 314 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 NKG7Q16617 165 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 PRTGQ2VWP7 1150 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 CCSMST1Q4G0I0 132 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.57□□□□□ -0.88
HDLBP-228ENST00000459788 WASHC2DQ5SRD0 308 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 C1orf189Q5VU69 101 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 ICE2Q659A1 982 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 ZNF425Q6IV72 752 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 CYHR1Q6ZMK1 362 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 PPP1R32Q7Z5V6 425 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 KCNMB4Q86W47 210 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 PDIK1LQ8N165 341 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 GALNT16Q8N428 558 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 EFCAB3Q8N7B9 438 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 C2CD4AQ8NCU7 369 aaPredicted RBP9.57□□□□□ -0.88
HDLBP-228ENST00000459788 FDCSPQ8NFU4 85 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 CD200R1Q8TD46 325 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 MCOLN3Q8TDD5 553 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 THAP11Q96EK4 314 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 RNF31Q96EP0 1072 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 SPSB2Q99619 263 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 MIPEPQ99797 713 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 AARSD1Q9BTE6 412 aaKnown RBP9.57□□□□□ -0.88
HDLBP-228ENST00000459788 DPH7Q9BTV6 452 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 ZNF304Q9HCX3 659 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 MRPS30Q9NP92 439 aaKnown RBP9.57□□□□□ -0.88
HDLBP-228ENST00000459788 SLC22A11Q9NSA0 550 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 TAS2R13Q9NYV9 303 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 MED16Q9Y2X0 877 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 CPAMD8Q8IZJ3 1885 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 RELNP78509 3460 aa9.57□□□□□ -0.88
HDLBP-228ENST00000459788 GOLGA8MH3BSY2 632 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 CNOT3O75175 753 aaKnown RBP9.56□□□□□ -0.88
HDLBP-228ENST00000459788 SLC16A8O95907 504 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 ERVK-10P10266 1014 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 FDXRP22570 491 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 OTX2P32243 289 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 VSX2P58304 361 aaPredicted RBP9.56□□□□□ -0.88
HDLBP-228ENST00000459788 AP2B1P63010 937 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 OCA2Q04671 838 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 DSG2Q14126 1118 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms