RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 C10orf88Q9H8K7 445 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 PTGFRNQ9P2B2 879 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 KLHL20Q9Y2M5 609 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 PCDHA3Q9Y5H8 950 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 HIVEP1P15822 2718 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 SYCE3A1L190 88 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 OR5H15A6NDH6 313 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 IDSB3KWA1 339 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 CDK2AP1O14519 115 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 SLC19A2O60779 497 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 PRAMEF2O60811 474 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 CTSVO60911 334 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 VPS26AO75436 327 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 CCR7P32248 378 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 MAGEA1P43355 309 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 EMP2P54851 167 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 VSX2P58304 361 aaPredicted RBP13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 CDH17Q12864 832 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 KRTCAP3Q53RY4 240 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 ABHD17BQ5VST6 288 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 GARNL3Q5VVW2 1013 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 VSTM4Q8IW00 320 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 OR2L3Q8NG85 312 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 KRT35Q92764 455 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 ZFYVE21Q9BQ24 234 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 GOLPH3Q9H4A6 298 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 MKKSQ9NPJ1 570 aaPredicted RBP13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 IMPACTQ9P2X3 320 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 MAU2Q9Y6X3 613 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 MYO7BQ6PIF6 2116 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 CCDC168Q8NDH2 2452 aa13.61□□□□□ -0.23
LYSMD3-202ENST00000453259 PKDREJQ9NTG1 2253 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 CCDC162PA2VCL2 907 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 GOLGA6L9A6NEM1 432 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 TXNDC9O14530 226 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 TACC2O95359 2948 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 TPH1P17752 444 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 AOAHP28039 575 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 RWDD2BP57060 319 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 RELAQ04206 551 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 ACVR1Q04771 509 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 TESK1Q15569 626 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 PRTGQ2VWP7 1150 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 HIBCHQ6NVY1 386 aaPredicted RBP13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 CPAMD8Q8IZJ3 1885 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 EID3Q8N140 333 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 OR13J1Q8NGT2 312 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 PANX3Q96QZ0 392 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 SPOCK3Q9BQ16 436 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 TUBB6Q9BUF5 446 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 ZNF700Q9H0M5 742 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 UTP6Q9NYH9 597 aaKnown RBP13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 SPATA7Q9P0W8 599 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 ZC3H7BQ9UGR2 993 aaKnown RBP13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 DCHS2Q6V1P9 2916 aa13.6□□□□□ -0.23
LYSMD3-202ENST00000453259 OR2A25A4D2G3 310 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 OR1I1O60431 355 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 WDPCPO95876 746 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 ESRRAP11474 423 aaPredicted RBP13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 PKMP14618 531 aaKnown RBP13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 TTPAP49638 278 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 FASTKD1Q53R41 847 aaKnown RBP13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 NAPRTQ6XQN6 538 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 Q6ZPB1 254 aaPredicted RBP13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 LRRC6Q86X45 466 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 CCDC170Q8IYT3 715 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 MPP5Q8N3R9 675 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 METTL27Q8N6F8 245 aaPredicted RBP13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 SIRT6Q8N6T7 355 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 OR2A1Q8NGT9 310 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 OR4L1Q8NH43 312 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 C8orf44Q96CB5 159 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 MAGED4Q96JG8 741 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 CABS1Q96KC9 395 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 C10orf90Q96M02 699 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 FOPNLQ96NB1 174 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 GPAMQ9HCL2 828 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 PLA2G3Q9NZ20 509 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 TRPC4Q9UBN4 977 aa13.59□□□□□ -0.23
LYSMD3-202ENST00000453259 RCCD1A6NED2 376 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 OR51F1A6NGY5 319 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 PRMT5O14744 637 aaPredicted RBP13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 CLDN14O95500 239 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 HEXBP07686 556 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 ANXA5P08758 320 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 ADRA1DP25100 572 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 MST1P26927 711 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 CMPK1P30085 196 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 SLC26A3P40879 764 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 SPA17Q15506 151 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 FRMPD2BQ6IN97 320 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 TMEM205Q6UW68 189 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 TAX1BP1Q86VP1 789 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 VRK3Q8IV63 474 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 ZNF295-AS1Q8N0V1 137 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 DNAAF3Q8N9W5 541 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 CFAP61Q8NHU2 1237 aa13.58□□□□□ -0.24
LYSMD3-202ENST00000453259 HDAC10Q969S8 669 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms