RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 AMER2Q8N7J2 671 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 WFDC5Q8TCV5 224 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 SLC7A6Q92536 515 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 RPL3LQ92901 407 aaKnown RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 PLSCR3Q9NRY6 295 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 NDFIP2Q9NV92 336 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 GLTPQ9NZD2 209 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 FBXO10Q9UK96 956 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 NDRG2Q9UN36 371 aaKnown RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 SNX10Q9Y5X0 201 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 NEDD8-MDP1E9PL57 170 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 TULP3O75386 442 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 DCNP07585 359 aaKnown RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 GPD1P21695 349 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 CCR1P32246 355 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 ZNF143P52747 638 aaPredicted RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 VBP1P61758 197 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 UBXN2BQ14CS0 331 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 CDO1Q16878 200 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 TBRG1Q3YBR2 411 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 MS4A13Q5J8X5 152 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 TPRG1LQ5T0D9 272 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 AGAP9Q5VTM2 703 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 ZNF517Q6ZMY9 492 aaPredicted RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 PIWIL4Q7Z3Z4 852 aaKnown RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 FAM131BQ86XD5 332 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 CLEC4FQ8N1N0 589 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 PLD6Q8N2A8 252 aaKnown RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 DEPDC4Q8N2C3 294 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 PARP16Q8N5Y8 322 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 FAM110BQ8TC76 370 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 TSPEARQ8WU66 669 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 STYXQ8WUJ0 223 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 CLDN23Q96B33 292 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 ZHX1-C8orf76Q96EF9 292 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 MFSD3Q96ES6 412 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 SHDQ96IW2 340 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 RPRD1AQ96P16 312 aaPredicted RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 RNF157Q96PX1 679 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 BBS2Q9BXC9 721 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 C1QTNF1Q9BXJ1 281 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 MAGEB5Q9BZ81 275 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 CCNB1IP1Q9NPC3 277 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 FAM118AQ9NWS6 357 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 ATP6V1HQ9UI12 483 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 KLHL21Q9UJP4 597 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 HCN2Q9UL51 889 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 NEU3Q9UQ49 428 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 BTBD3Q9Y2F9 522 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 PCDHB3Q9Y5E6 796 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 KCNE2Q9Y6J6 123 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 CHD5Q8TDI0 1954 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 ATP6V1G2-DDX39BF2Z307 99 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 MAN2B1O00754 1011 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 TSPAN3O60637 253 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 PAGE1O75459 146 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 EGFP01133 1207 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 IFNA16P05015 189 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 CISD3P0C7P0 127 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 CHRM3P20309 590 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 OXTRP30559 389 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 SDC4P31431 198 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 IL12RB1P42701 662 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 CLCN5P51795 746 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 NRLP54845 237 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 DNAJB13P59910 316 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 STK11Q15831 433 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 CYP51A1Q16850 503 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 SMTNL2Q2TAL5 461 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 GPAT3Q53EU6 434 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 ZC3H12BQ5HYM0 836 aaKnown RBP12.73□□□□□ -0.37
DDX56-206ENST00000446987 COLEC12Q5KU26 742 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 RAP1GAP2Q684P5 730 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 PKN3Q6P5Z2 889 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 Q6ZS52 159 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 PROSER1Q86XN7 944 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 NAT16Q8N8M0 369 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 FAM83FQ8NEG4 500 aaPredicted RBP12.73□□□□□ -0.37
DDX56-206ENST00000446987 P2RY13Q9BPV8 354 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 ALOXE3Q9BYJ1 711 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 TRIM54Q9BYV2 358 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 TKTL2Q9H0I9 626 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDX56-206ENST00000446987 MFSD1Q9H3U5 465 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 IFT22Q9H7X7 185 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 ZNF358Q9NW07 568 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 PCDHGB6Q9Y5F9 930 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 HS3ST4Q9Y661 456 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 HSPE1-MOB4S4R3N1 261 aa12.73□□□□□ -0.37
DDX56-206ENST00000446987 MYO18AQ92614 2054 aaKnown RBP12.73□□□□□ -0.37
DDX56-206ENST00000446987 TYW5A2RUC4 315 aaKnown RBP12.72□□□□□ -0.37
DDX56-206ENST00000446987 KRT87PA6NCN2 255 aa12.72□□□□□ -0.37
DDX56-206ENST00000446987 FAM170BA6NMN3 283 aa12.72□□□□□ -0.37
DDX56-206ENST00000446987 ZNF30P17039 623 aa12.72□□□□□ -0.37
DDX56-206ENST00000446987 TACR2P21452 398 aa12.72□□□□□ -0.37
DDX56-206ENST00000446987 POLD2P49005 469 aa12.72□□□□□ -0.37
DDX56-206ENST00000446987 SLC11A2P49281 568 aa12.72□□□□□ -0.37
DDX56-206ENST00000446987 RPS24P62847 133 aaKnown RBP12.72□□□□□ -0.37
DDX56-206ENST00000446987 FAPQ12884 760 aa12.72□□□□□ -0.37
DDX56-206ENST00000446987 MFSD13AQ14CX5 517 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms