RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZER1Q7Z7L7 766 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 PHLDB2Q86SQ0 1253 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 ODF3L1Q8IXM7 274 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 PM20D2Q8IYS1 436 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 GCSAMQ8N6F7 178 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 EXOC6Q8TAG9 804 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 SLC20A1Q8WUM9 679 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 UBLCP1Q8WVY7 318 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 SORCS1Q8WY21 1168 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 TMEM186Q96B77 213 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 AP2M1Q96CW1 435 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 STAMBPL1Q96FJ0 436 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZNF560Q96MR9 790 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 DUX5Q96PT3 197 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 PANX3Q96QZ0 392 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 CTAGE1Q96RT6 745 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 NAP1L3Q99457 506 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 MTERF1Q99551 399 aaKnown RBP4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 RAB6CQ9H0N0 254 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 CSTL1Q9H114 145 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 UBTD1Q9HAC8 227 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZNF556Q9HAH1 456 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 GAGE2DQ9UEU5 116 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 MAD2L2Q9UI95 211 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 CCPG1Q9ULG6 757 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 GRIP1Q9Y3R0 1128 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 NME7Q9Y5B8 376 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 PCDHGB1Q9Y5G3 927 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 PCDHAC2Q9Y5I4 1007 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 DHX29Q7Z478 1369 aaKnown RBP4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 ARAP1Q96P48 1450 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 PTPRCP08575 1304 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 NPHP3Q7Z494 1330 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 IGHV4OR15-8A0A075B7B6 117 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 A0A0G2JPF8 293 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 A0A1W2PPW3 197 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 KPNA7A9QM74 516 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 HNRNPCL3B7ZW38 293 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 PLK4O00444 970 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 ANKRD28O15084 1053 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 OR10H2O60403 315 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 LUC7L3O95232 432 aaKnown RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 PLGP00747 810 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 MT-ATP6P00846 226 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 PDGFBP01127 241 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 CSN3P07498 182 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 HNRNPCL4P0DMR1 293 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 MYOD1P15172 320 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 ITGA2P17301 1181 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 TMPOP42166 694 aaKnown RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 ASMTP46597 345 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 MAPK12P53778 367 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 MFAP3P55082 362 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 AKAP17AQ02040 695 aaKnown RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 RELQ04864 619 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 EEF1A2Q05639 463 aaKnown RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 CAPRIN2Q6IMN6 1127 aaKnown RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 TRNP1Q6NT89 227 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 MFSD12Q6NUT3 480 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 CYB5D1Q6P9G0 228 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 TMPRSS11FQ6ZWK6 438 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 NRARPQ7Z6K4 114 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 AQP12AQ8IXF9 295 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 RNF113BQ8IZP6 322 aaKnown RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 BATF2Q8N1L9 274 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 FBXW8Q8N3Y1 598 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 AMER3Q8N944 861 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 GMCL1P1Q8NEA9 526 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 DENND6BQ8NEG7 585 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 PIGTQ969N2 578 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 MRPL38Q96DV4 380 aaKnown RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 SGF29Q96ES7 293 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 FAM81BQ96LP2 452 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 SAMD8Q96LT4 415 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 IL17FQ96PD4 163 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 CRACR2AQ9BSW2 395 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 S1PR5Q9H228 398 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 RWDD1Q9H446 243 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 CDH20Q9HBT6 801 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 HHATLQ9HCP6 504 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 SLC35D1Q9NTN3 355 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 FAM118AQ9NWS6 357 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 RCC2Q9P258 522 aaKnown RBP4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 MALT1Q9UDY8 824 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 FBXL2Q9UKC9 423 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 KCNS2Q9ULS6 477 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 GPR132Q9UNW8 380 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 KCNK6Q9Y257 313 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 VDAC3Q9Y277 283 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 LRP12Q9Y561 859 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 WDR81Q562E7 1941 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 FAM205AQ6ZU69 1335 aa4.2□□□□□ -1.74
HMGB1P48-201ENST00000446155 MRC2Q9UBG0 1479 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 SAA2-SAA4A0A096LPE2 208 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 PLSCR5A0PG75 271 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 HNRNPCL2B2RXH8 293 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 LDB3O75112 727 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 PTBP3O95758 552 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms