RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TREX1Q9NSU2 369 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 DHCR7Q9UBM7 475 aaKnown RBP7.45□□□□□ -1.22
CD44-211ENST00000442151 PLAGL1Q9UM63 463 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 COPG1Q9Y678 874 aaKnown RBP7.45□□□□□ -1.22
CD44-211ENST00000442151 GOLGA6L10A0A0M3HER8 536 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 EIF3FO00303 357 aaPredicted RBP7.45□□□□□ -1.22
CD44-211ENST00000442151 ZBTB14O43829 449 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 SORBS2O94875 1100 aaKnown RBP7.45□□□□□ -1.22
CD44-211ENST00000442151 VAPBO95292 243 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 CYC1P08574 325 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 ANXA5P08758 320 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 MPC1LP0DKB6 136 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 ITGA3P26006 1051 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 MGAT1P26572 445 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 FMO4P31512 558 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 GLRBP48167 497 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 ZIC1Q15915 447 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 SLC6A19Q695T7 634 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 NEPROQ6NW34 567 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 KRT222Q8N1A0 295 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 MCUQ8NE86 351 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 FLVCR1-AS1Q8TAF5 88 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 MAGOHBQ96A72 148 aaKnown RBP7.45□□□□□ -1.22
CD44-211ENST00000442151 MIEF2Q96C03 454 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 ZFYVE21Q9BQ24 234 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 NUDT9Q9BW91 350 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 FAM129AQ9BZQ8 928 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 LHPPQ9H008 270 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 MRPS30Q9NP92 439 aaKnown RBP7.45□□□□□ -1.22
CD44-211ENST00000442151 LZTFL1Q9NQ48 299 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 ZNF282Q9UDV7 671 aaPredicted RBP7.45□□□□□ -1.22
CD44-211ENST00000442151 CDYLQ9Y232 598 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 JRKLQ9Y4A0 524 aa7.45□□□□□ -1.22
CD44-211ENST00000442151 TENM4Q6N022 2769 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 FAM237BA0A1B0GVD1 139 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 H3BMH7 237 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 K7EM74 188 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 MAP2K7O14733 419 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 PRICKLE3O43900 615 aaPredicted RBP7.44□□□□□ -1.22
CD44-211ENST00000442151 MATN4O95460 622 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 KRT14P02533 472 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 ETS1P14921 441 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 GNLYP22749 145 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 GRIA1P42261 906 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 GRIA3P42263 894 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 SKIV2L2P42285 1042 aaKnown RBP7.44□□□□□ -1.22
CD44-211ENST00000442151 RGS4P49798 205 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 MMP16P51512 607 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 SRSF1Q07955 248 aaKnown RBP eCLIP7.44□□□□□ -1.22
CD44-211ENST00000442151 ILF2Q12905 390 aaKnown RBP7.44□□□□□ -1.22
CD44-211ENST00000442151 PTK6Q13882 451 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 TYSND1Q2T9J0 566 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 DEFB110Q30KQ9 67 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 WASHC2DQ5SRD0 308 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 B3GNTL1Q67FW5 361 aaPredicted RBP7.44□□□□□ -1.22
CD44-211ENST00000442151 TBC1D19Q8N5T2 526 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 FBXO15Q8NCQ5 510 aaPredicted RBP7.44□□□□□ -1.22
CD44-211ENST00000442151 PPP4R1Q8TF05 950 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 INPP5DQ92835 1189 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 ZNF285Q96NJ3 590 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 WDR77Q9BQA1 342 aaPredicted RBP7.44□□□□□ -1.22
CD44-211ENST00000442151 NAT9Q9BTE0 207 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 RUBCNLQ9H714 662 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 C14orf105Q9NVL8 296 aa7.44□□□□□ -1.22
CD44-211ENST00000442151 MYO18BQ8IUG5 2567 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 BLACEA4D250 179 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 IQCF5A8MTL0 148 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 CDK2AP1O14519 115 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 NDC80O14777 642 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 USP1O94782 785 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 HPP00738 406 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 PDGFAP04085 211 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 UQCRHP07919 91 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 ZSCAN5DPP0CG00 497 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 FBLP22087 321 aaKnown RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 NMBRP28336 390 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 MAGEA6P43360 314 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 AVPR1BP47901 424 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 EMP2P54851 167 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 VSX2P58304 361 aaPredicted RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 SKP1P63208 163 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 GPS1Q13098 491 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 DHX34Q14147 1143 aaKnown RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 TLR1Q15399 786 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 NKG7Q16617 165 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 C4orf17Q53FE4 359 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 NIPAL1Q6NVV3 410 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 ISLR2Q6UXK2 745 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 NAPRTQ6XQN6 538 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 PPP1R32Q7Z5V6 425 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 VRK3Q8IV63 474 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 KBTBD2Q8IY47 623 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 C2orf73Q8N5S3 287 aaPredicted RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 RBMXL3Q8N7X1 1067 aaKnown RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 LINC01555Q8NAE3 123 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 OR2L3Q8NG85 312 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 SUN3Q8TAQ9 357 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 LPGAT1Q92604 370 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 CABS1Q96KC9 395 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 ZNF778Q96MU6 729 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms