RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 RBPJQ06330 500 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 SPA17Q15506 151 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 WASHC2DQ5SRD0 308 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 RAD9BQ6WBX8 426 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 MICALCLQ6ZW33 695 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 LAPTM4BQ86VI4 370 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 TTC29Q8NA56 475 aaPredicted RBP7.52□□□□□ -1.21
LINC00578-201ENST00000439009 BRIX1Q8TDN6 353 aaKnown RBP7.52□□□□□ -1.21
LINC00578-201ENST00000439009 THAP3Q8WTV1 239 aaPredicted RBP7.52□□□□□ -1.21
LINC00578-201ENST00000439009 MIEF2Q96C03 454 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 C8orf44Q96CB5 159 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 HAUS1Q96CS2 278 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 MTFMTQ96DP5 389 aaKnown RBP7.52□□□□□ -1.21
LINC00578-201ENST00000439009 POM121Q96HA1 1249 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 SPATA13Q96N96 652 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 SELENOSQ9BQE4 189 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 TGIF2Q9GZN2 237 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 ENKD1Q9H0I2 346 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 ZNF700Q9H0M5 742 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 C10orf88Q9H8K7 445 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 ZNF304Q9HCX3 659 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 PTGFRNQ9P2B2 879 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 ITGB1BP2Q9UKP3 347 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 PLAGL1Q9UM63 463 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 EPN1Q9Y6I3 576 aaPredicted RBP7.52□□□□□ -1.21
LINC00578-201ENST00000439009 ANKHD1Q8IWZ3 2542 aaKnown RBP7.52□□□□□ -1.21
LINC00578-201ENST00000439009 PCNX1Q96RV3 2341 aa7.52□□□□□ -1.21
LINC00578-201ENST00000439009 CCDC88CQ9P219 2028 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 OR5H15A6NDH6 313 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 H7C0C1 242 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 C19orf84I3L1E1 186 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 RASGRF2O14827 1237 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 AKR1B10O60218 316 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 ZNF189O75820 626 aaPredicted RBP7.51□□□□□ -1.21
LINC00578-201ENST00000439009 SLCO2B1O94956 709 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 CLDN14O95500 239 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 RPN2P04844 631 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 TUBBP07437 444 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 OR56A5P0C7T3 313 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 ICAM2P13598 275 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 CCR7P32248 378 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 FOXN2P32314 431 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 ATP5OP48047 213 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 COPS2P61201 443 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 AP2B1P63010 937 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 DSG2Q14126 1118 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 SPARCL1Q14515 664 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 BRD3Q15059 726 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 CDSNQ15517 529 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 SF1Q15637 639 aaKnown RBP7.51□□□□□ -1.21
LINC00578-201ENST00000439009 C3AR1Q16581 482 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 PRTGQ2VWP7 1150 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 KRTCAP3Q53RY4 240 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 TMEM205Q6UW68 189 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 UNC5DQ6UXZ4 953 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 NAPRTQ6XQN6 538 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 KIAA1328Q86T90 577 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 VRK3Q8IV63 474 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 DCUN1D3Q8IWE4 304 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 DTWD1Q8N5C7 304 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 SIRT6Q8N6T7 355 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 HMGCLL1Q8TB92 370 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 ASZ1Q8WWH4 475 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 MVB12AQ96EY5 273 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 IMMP1LQ96LU5 166 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 CCDC42Q96M95 316 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 CHP1Q99653 195 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 NAPGQ99747 312 aaPredicted RBP7.51□□□□□ -1.21
LINC00578-201ENST00000439009 FERMT1Q9BQL6 677 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 DESI2Q9BSY9 194 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.51□□□□□ -1.21
LINC00578-201ENST00000439009 NHEJ1Q9H9Q4 299 aaPredicted RBP7.51□□□□□ -1.21
LINC00578-201ENST00000439009 MCCC2Q9HCC0 563 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 RIC8BQ9NVN3 520 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.51□□□□□ -1.21
LINC00578-201ENST00000439009 RIMKLBQ9ULI2 386 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 MAU2Q9Y6X3 613 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 MED13LQ71F56 2210 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 NAV3Q8IVL0 2385 aa7.51□□□□□ -1.21
LINC00578-201ENST00000439009 LOC105369274A0A096LPK9 316 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 LOC102723532A0A0G2JNH3 316 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 OR2A25A4D2G3 310 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 IDSB3KWA1 339 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 F8W8V4 182 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 WFS1O76024 890 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 STK10O94804 968 aaKnown RBP7.5□□□□□ -1.21
LINC00578-201ENST00000439009 RBP3P10745 1247 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 ITGAMP11215 1152 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 TPH1P17752 444 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 CXCR2P25025 360 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 PTPN7P35236 360 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 SLC26A3P40879 764 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 MARCKSL1P49006 195 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 EMP2P54851 167 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 CASP6P55212 293 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 VSX2P58304 361 aaPredicted RBP7.5□□□□□ -1.21
LINC00578-201ENST00000439009 KIF5AQ12840 1032 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 PCOLCEQ15113 449 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 WHAMMP3Q1A5X7 153 aa7.5□□□□□ -1.21
LINC00578-201ENST00000439009 PARP6Q2NL67 630 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms