RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 ZNF778Q96MU6 729 aa14.26□□□□□ -0.13
RPUSD3-208ENST00000433972 AGAP4Q96P64 663 aa14.26□□□□□ -0.13
RPUSD3-208ENST00000433972 WDR77Q9BQA1 342 aaPredicted RBP14.26□□□□□ -0.13
RPUSD3-208ENST00000433972 NAT9Q9BTE0 207 aa14.26□□□□□ -0.13
RPUSD3-208ENST00000433972 TREX1Q9NSU2 369 aa14.26□□□□□ -0.13
RPUSD3-208ENST00000433972 ASF1BQ9NVP2 202 aa14.26□□□□□ -0.13
RPUSD3-208ENST00000433972 UTP6Q9NYH9 597 aaKnown RBP14.26□□□□□ -0.13
RPUSD3-208ENST00000433972 SPATA7Q9P0W8 599 aa14.26□□□□□ -0.13
RPUSD3-208ENST00000433972 FBXL4Q9UKA2 621 aa14.26□□□□□ -0.13
RPUSD3-208ENST00000433972 SLC5A6Q9Y289 635 aa14.26□□□□□ -0.13
RPUSD3-208ENST00000433972 KLK4Q9Y5K2 254 aa14.26□□□□□ -0.13
RPUSD3-208ENST00000433972 FITM1A5D6W6 292 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 ANKUB1A6NFN9 424 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 IQCF5A8MTL0 148 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 PRPF4O43172 522 aaKnown RBP eCLIP14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 VAPBO95292 243 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 CBX6O95503 412 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 ERVK-10P10266 1014 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 RPS3P23396 243 aaKnown RBP eCLIP14.25□□□□□ -0.138e-7■■■■■ 45.5
RPUSD3-208ENST00000433972 GLRBP48167 497 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 OCA2Q04671 838 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 CALCOCO2Q13137 446 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 THOC5Q13769 683 aaKnown RBP14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 RBBP7Q16576 425 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 NKG7Q16617 165 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 KCTD19Q17RG1 926 aaPredicted RBP14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 TUBB8Q3ZCM7 444 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 MICALCLQ6ZW33 695 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 TAX1BP1Q86VP1 789 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 C2orf73Q8N5S3 287 aaPredicted RBP14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 MFSD3Q96ES6 412 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 ZNF285Q96NJ3 590 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 IL17FQ96PD4 163 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 TRIM31Q9BZY9 425 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 SLC6A20Q9NP91 592 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 VPS9D1Q9Y2B5 631 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 UTP11Q9Y3A2 253 aaKnown RBP14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 PCDHGA10Q9Y5H3 936 aa14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 USP9XQ93008 2570 aaPredicted RBP14.25□□□□□ -0.13
RPUSD3-208ENST00000433972 ZNF839A8K0R7 811 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 CNOT3O75175 753 aaKnown RBP14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 VPS26AO75436 327 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 C1orf105O95561 183 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 TTC4O95801 387 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 CTSBP07858 339 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 ATP5DP30049 168 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 ARL4CP56559 192 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 GRB7Q14451 532 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 SEMA3AQ14563 771 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 ANKRD20A4Q4UJ75 823 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 B3GNTL1Q67FW5 361 aaPredicted RBP14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 FCRL6Q6DN72 434 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 KIAA0930Q6ICG6 404 aaPredicted RBP14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 MAMDC2Q7Z304 686 aaPredicted RBP14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 FAM20CQ8IXL6 584 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 KRT222Q8N1A0 295 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 LKAAEAR1Q8TD35 194 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 CALML6Q8TD86 181 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 ZNF669Q96BR6 464 aaPredicted RBP14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 C19orf60Q96EN9 201 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 TCF12Q99081 682 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 SPSB2Q99619 263 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 ERP44Q9BS26 406 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 LHPPQ9H008 270 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 RAB17Q9H0T7 212 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 P2RY12Q9H244 342 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 ZNF304Q9HCX3 659 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 FAM114A2Q9NRY5 505 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 SLC22A11Q9NSA0 550 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 CDC14AQ9UNH5 594 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 KLHL20Q9Y2M5 609 aa14.24□□□□□ -0.13
RPUSD3-208ENST00000433972 HYKKA2RU49 373 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 PCDH17O14917 1159 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 USP1O94782 785 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 ESR1P03372 595 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 FDXRP22570 491 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 IVDP26440 423 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 CMPK1P30085 196 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 HSD17B2P37059 387 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 GRIA3P42263 894 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 MAGEA3P43357 314 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 ITGA8P53708 1063 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 EMP3P54852 163 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 ADARP55265 1226 aaKnown RBP14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 EIF3BP55884 814 aaKnown RBP14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 PER3P56645 1201 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 VSX2P58304 361 aaPredicted RBP14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 C2orf54Q08AI8 447 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 MUM1Q2TAK8 710 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 BBS9Q3SYG4 887 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 NEPROQ6NW34 567 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 IGFL2Q6UWQ7 119 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 CES3Q6UWW8 571 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 LMNTD2Q8IXW0 634 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 ST6GALNAC3Q8NDV1 305 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 OR2L3Q8NG85 312 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 MVB12AQ96EY5 273 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 SIGLEC10Q96LC7 697 aa14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 BARD1Q99728 777 aaKnown RBP14.23□□□□□ -0.13
RPUSD3-208ENST00000433972 TRIM51Q9BSJ1 452 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms