RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 DHPSP49366 369 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 PITX1P78337 314 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 TRIM71Q2Q1W2 868 aaKnown RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 TECRLQ5HYJ1 363 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 TMEM126BQ8IUX1 230 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 OR10H5Q8NGA6 315 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 ZHX1-C8orf76Q96EF9 292 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 ZDHHC12Q96GR4 267 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 NDC1Q9BTX1 674 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 ARNT2Q9HBZ2 717 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 TAS2R1Q9NYW7 299 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 GALPQ9UBC7 116 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 TRBV23OR9-2A0A075B6M9 112 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 RIIAD1A6NNX1 92 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 XKRYO14609 159 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 TLX3O43711 291 aaPredicted RBP11.65□□□□□ -0.54
PTPRF-205ENST00000414879 NR2C1P13056 603 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 MYL9P24844 172 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 CCR10P46092 362 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 PLA2G16P53816 162 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 NIPAL4Q0D2K0 466 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 MSANTD1Q6ZTZ1 278 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 VN1R5Q7Z5H4 357 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 HCAR2Q8TDS4 363 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 LRRC58Q96CX6 371 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 CADM1Q9BY67 442 aaKnown RBP11.65□□□□□ -0.54
PTPRF-205ENST00000414879 ZCCHC3Q9NUD5 404 aaKnown RBP11.65□□□□□ -0.54
PTPRF-205ENST00000414879 SSR3Q9UNL2 185 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 POMPQ9Y244 141 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 MYH9P35579 1960 aaKnown RBP11.65□□□□□ -0.54
PTPRF-205ENST00000414879 PRSS51A0A1B0GVH4 220 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 CD1DP15813 335 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 CREB1P16220 341 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 SPINT3P49223 89 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 GRM2Q14416 872 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 SLC9B1Q4ZJI4 515 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 CCDC103Q8IW40 242 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 C2orf73Q8N5S3 287 aaPredicted RBP11.65□□□□□ -0.54
PTPRF-205ENST00000414879 ZMIZ2Q8NF64 920 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 OR10A6Q8NH74 314 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 ACTL8Q9H568 366 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 SERTAD3Q9UJW9 196 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 NENFQ9UMX5 172 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 COMMD3-BMI1R4GMX3 469 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 MEIS3P2A8K0S8 358 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 LOC730098B7Z3J9 87 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 SCN2BO60939 215 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 TIPRLO75663 272 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 KRT33AO76009 404 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 PRKCGP05129 697 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 GJA8P48165 433 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 NCBP2P52298 156 aaKnown RBP eCLIP11.65□□□□□ -0.54
PTPRF-205ENST00000414879 DSTNP60981 165 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 FAM129CQ86XR2 697 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 FKBP10Q96AY3 582 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 ZNF689Q96CS4 500 aaPredicted RBP11.65□□□□□ -0.54
PTPRF-205ENST00000414879 NKX2-4Q9H2Z4 354 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 C12orf65Q9H3J6 166 aaKnown RBP11.65□□□□□ -0.54
PTPRF-205ENST00000414879 TAC3Q9UHF0 121 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 CD207Q9UJ71 328 aa11.65□□□□□ -0.54
PTPRF-205ENST00000414879 DLGAP3O95886 979 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 HSPB3Q12988 150 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 CST6Q15828 149 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 TMEM35AQ53FP2 167 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 ANKRD33Q7Z3H0 272 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 PACS2Q86VP3 889 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 RALGPS2Q86X27 583 aaPredicted RBP11.65□□□□□ -0.55
PTPRF-205ENST00000414879 COMMD2Q86X83 199 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 ZDHHC21Q8IVQ6 265 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 CACTIN-AS1Q8N1I8 211 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 GEMIN6Q8WXD5 167 aaKnown RBP11.65□□□□□ -0.55
PTPRF-205ENST00000414879 FCGR1BQ92637 280 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 KLK6Q92876 244 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 NXPE3Q969Y0 559 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 HERPUD2Q9BSE4 406 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 ZBTB26Q9HCK0 441 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 EQTNQ9NQ60 294 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 KCTD3Q9Y597 815 aa11.65□□□□□ -0.55
PTPRF-205ENST00000414879 PAPPA2Q9BXP8 1791 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 BCKDKO14874 412 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 ERI3O43414 337 aaKnown RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 NUP62P37198 522 aaPredicted RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 CAPGP40121 348 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 MYBPC3Q14896 1274 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 COQ5Q5HYK3 327 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 LRRC73Q5JTD7 316 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 SLC36A4Q6YBV0 504 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 RNF44Q7L0R7 432 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 ZNF598Q86UK7 904 aaKnown RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 JAZF1Q86VZ6 243 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 DCP2Q8IU60 420 aaKnown RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 RBM12BQ8IXT5 1001 aaKnown RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 C1orf52Q8N6N3 182 aaKnown RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 ZCCHC10Q8TBK6 192 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 EBPLQ9BY08 206 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 DENND2DQ9H6A0 471 aaPredicted RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 PAPOLBQ9NRJ5 636 aaKnown RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 SDHAF3Q9NRP4 125 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 OBP2AQ9NY56 170 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 CLIC1O00299 241 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms